RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 PAEPP09466 180 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 VDRP11473 427 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 COL6A1P12109 1028 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 KCNE1P15382 129 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 TAF6P49848 677 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 MRPS25P82663 173 aaKnown RBP10.13□□□□□ -0.79
PAAF1-209ENST00000540659 PTP4A2Q12974 167 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 ZNF211Q13398 564 aaPredicted RBP10.13□□□□□ -0.79
PAAF1-209ENST00000540659 TRIM71Q2Q1W2 868 aaKnown RBP10.13□□□□□ -0.79
PAAF1-209ENST00000540659 SV2CQ496J9 727 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 SGO2Q562F6 1265 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 XKR4Q5GH76 650 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 CYP4A22Q5TCH4 519 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 PPP1R2P3Q6NXS1 205 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 ERICH1Q86X53 443 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 PHF13Q86YI8 300 aaPredicted RBP10.13□□□□□ -0.79
PAAF1-209ENST00000540659 WDTC1Q8N5D0 677 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 LRRC52Q8N7C0 313 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 UBL4BQ8N7F7 174 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 SPATA4Q8NEY3 305 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 UBA3Q8TBC4 463 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 FAXDC2Q96IV6 333 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 LPIN3Q9BQK8 851 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 PARD6BQ9BYG5 372 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 TRIM7Q9C029 511 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 AVENQ9NQS1 362 aaPredicted RBP10.13□□□□□ -0.79
PAAF1-209ENST00000540659 CHST12Q9NRB3 414 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 ARGLU1Q9NWB6 273 aaPredicted RBP10.13□□□□□ -0.79
PAAF1-209ENST00000540659 MIOSQ9NXC5 875 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 BARX2Q9UMQ3 279 aaPredicted RBP10.13□□□□□ -0.79
PAAF1-209ENST00000540659 USTQ9Y2C2 406 aa10.13□□□□□ -0.79
PAAF1-209ENST00000540659 A8MXQ7 604 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 KPNA7A9QM74 516 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 GOLGA8SH3BPF8 625 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 PIK3R2O00459 728 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 PIRO00625 290 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 CES2O00748 559 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 SPTLC1O15269 473 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 LSM8O95777 96 aaKnown RBP10.12□□□□□ -0.79
PAAF1-209ENST00000540659 CALB1P05937 261 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 CKBP12277 381 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 GJC1P36383 396 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 SSR1P43307 286 aaKnown RBP10.12□□□□□ -0.79
PAAF1-209ENST00000540659 MARCKSL1P49006 195 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 SCNN1GP51170 649 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 AFF1P51825 1210 aaKnown RBP10.12□□□□□ -0.79
PAAF1-209ENST00000540659 C1QBPQ07021 282 aaKnown RBP10.12□□□□□ -0.79
PAAF1-209ENST00000540659 GOLGA7BQ2TAP0 167 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 DAB2IPQ5VWQ8 1189 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 AADACL2Q6P093 401 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 DNAJC24Q6P3W2 148 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 ADAT2Q7Z6V5 191 aaKnown RBP10.12□□□□□ -0.79
PAAF1-209ENST00000540659 ACOT1Q86TX2 421 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 KLHL7Q8IXQ5 586 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 TTC39CQ8N584 583 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 RSPH1Q8WYR4 309 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 KRT35Q92764 455 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 PNKPQ96T60 521 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 GAD1Q99259 594 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 ADAM2Q99965 735 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 HINFPQ9BQA5 517 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 HTATIP2Q9BUP3 242 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 NT5C1AQ9BXI3 368 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 AP1M1Q9BXS5 423 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 DPEP3Q9H4B8 488 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 PLEKHA4Q9H4M7 779 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 FAM124BQ9H5Z6 455 aaPredicted RBP10.12□□□□□ -0.79
PAAF1-209ENST00000540659 SYNCQ9H7C4 482 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 MRPL47Q9HD33 250 aaKnown RBP10.12□□□□□ -0.79
PAAF1-209ENST00000540659 RBM12Q9NTZ6 932 aaKnown RBP10.12□□□□□ -0.79
PAAF1-209ENST00000540659 RNF14Q9UBS8 474 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 TJP2Q9UDY2 1190 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 CYTH4Q9UIA0 394 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 SCINQ9Y6U3 715 aa10.12□□□□□ -0.79
PAAF1-209ENST00000540659 ARL5CA6NH57 179 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 CASTOR2A6NHX0 329 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 ARVCFO00192 962 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 PGRMC1O00264 195 aaKnown RBP10.11□□□□□ -0.79
PAAF1-209ENST00000540659 SEC31AO94979 1220 aaKnown RBP10.11□□□□□ -0.79
PAAF1-209ENST00000540659 POMCP01189 267 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 THP07101 528 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 PDGFRBP09619 1106 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 CYP3A5P20815 502 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 MMP8P22894 467 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 PAX3P23760 479 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 PNPLA4P41247 253 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 CLCN6P51797 869 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 TUBB4BP68371 445 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 INCA1Q0VD86 236 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 MAMLD1Q13495 774 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 BFSP2Q13515 415 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 LONRF2Q1L5Z9 754 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 LRRC26Q2I0M4 334 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 SOWAHAQ2M3V2 549 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 FAM26DQ5JW98 314 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 PPP1R26Q5T8A7 1209 aaPredicted RBP10.11□□□□□ -0.79
PAAF1-209ENST00000540659 SEL1L2Q5TEA6 688 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 DCAF12L1Q5VU92 463 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 CCDC70Q6NSX1 233 aa10.11□□□□□ -0.79
PAAF1-209ENST00000540659 AGMOQ6ZNB7 445 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms