RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 SRCAPQ6ZRS2 3230 aa12.96□□□□□ -0.33
NPC1-202ENST00000540608 ZNF541Q9H0D2 1346 aa12.96□□□□□ -0.33
NPC1-202ENST00000540608 A0A1W2PPM1 405 aa12.96□□□□□ -0.34
NPC1-202ENST00000540608 TRAFD1O14545 582 aaPredicted RBP12.96□□□□□ -0.34
NPC1-202ENST00000540608 ECM2O94769 699 aaPredicted RBP12.96□□□□□ -0.34
NPC1-202ENST00000540608 PAX7P23759 505 aa12.96□□□□□ -0.34
NPC1-202ENST00000540608 PDIA2Q13087 525 aaKnown RBP12.96□□□□□ -0.34
NPC1-202ENST00000540608 ZC3H12AQ5D1E8 599 aaKnown RBP12.96□□□□□ -0.34
NPC1-202ENST00000540608 ZNF75CPQ92670 426 aaPredicted RBP12.96□□□□□ -0.34
NPC1-202ENST00000540608 SLC7A6OSQ96CW6 309 aaPredicted RBP12.96□□□□□ -0.34
NPC1-202ENST00000540608 FAXDC2Q96IV6 333 aa12.96□□□□□ -0.34
NPC1-202ENST00000540608 RNPEPL1Q9HAU8 725 aa12.96□□□□□ -0.34
NPC1-202ENST00000540608 RBAKQ9NYW8 714 aaPredicted RBP12.96□□□□□ -0.34
NPC1-202ENST00000540608 NKX1-2Q9UD57 310 aaPredicted RBP12.96□□□□□ -0.34
NPC1-202ENST00000540608 FETUBQ9UGM5 382 aa12.96□□□□□ -0.34
NPC1-202ENST00000540608 NUB1Q9Y5A7 615 aa12.96□□□□□ -0.34
NPC1-202ENST00000540608 WDR81Q562E7 1941 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 UTRNP46939 3433 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 hCG_1818297A0A087WSY0 165 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 E7ENQ6 273 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 ZWINTO95229 277 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 NR3C2P08235 984 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 KCNA2P16389 499 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 CALB2P22676 271 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 GEMIN4P57678 1058 aaKnown RBP12.95□□□□□ -0.34
NPC1-202ENST00000540608 ZNF252P-AS1Q0IIN9 211 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 TFDP3Q5H9I0 405 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 EFHC2Q5JST6 749 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 SLFN12LQ6IEE8 588 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 PCGF5Q86SE9 256 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 KCNN1Q92952 543 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 TBC1D10AQ9BXI6 508 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 MAK16Q9BXY0 300 aaKnown RBP12.95□□□□□ -0.34
NPC1-202ENST00000540608 TRIM6Q9C030 488 aaPredicted RBP12.95□□□□□ -0.34
NPC1-202ENST00000540608 HAPLN2Q9GZV7 340 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 RPAP3Q9H6T3 665 aaPredicted RBP12.95□□□□□ -0.34
NPC1-202ENST00000540608 PCDH9Q9HC56 1237 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 CTDP1Q9Y5B0 961 aaPredicted RBP12.95□□□□□ -0.34
NPC1-202ENST00000540608 ARID2Q68CP9 1835 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 TCRBV5S1A1TA0A578 114 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 F8VP50 259 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 CALB1P05937 261 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 ZNF132P52740 706 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 NOP14P78316 857 aaKnown RBP12.95□□□□□ -0.34
NPC1-202ENST00000540608 BAATQ14032 418 aaPredicted RBP12.95□□□□□ -0.34
NPC1-202ENST00000540608 SLC45A4Q5BKX6 768 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 CAPN12Q6ZSI9 719 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 OTOAQ7RTW8 1153 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 LONP2Q86WA8 852 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 DHX37Q8IY37 1157 aaKnown RBP12.95□□□□□ -0.34
NPC1-202ENST00000540608 FAM13CQ8NE31 585 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 DDX56Q9NY93 547 aaKnown RBP12.95□□□□□ -0.34
NPC1-202ENST00000540608 RABGEF1Q9UJ41 708 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 LRRC42Q9Y546 428 aa12.95□□□□□ -0.34
NPC1-202ENST00000540608 VWA5AO00534 786 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 LIN7AO14910 233 aaPredicted RBP12.94□□□□□ -0.34
NPC1-202ENST00000540608 PEX11AO75192 247 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 LDHAP00338 332 aaKnown RBP12.94□□□□□ -0.34
NPC1-202ENST00000540608 PIGRP01833 764 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 KRT4P19013 534 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 CDKN2BP42772 138 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 GPX6P59796 221 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 PRKCEQ02156 737 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 LVRNQ6Q4G3 990 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 ZNF398Q8TD17 642 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 ATG4CQ96DT6 458 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 CGRRF1Q99675 332 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 TMEM121Q9BTD3 319 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 CYP39A1Q9NYL5 469 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 FARP1Q9Y4F1 1045 aaPredicted RBP12.94□□□□□ -0.34
NPC1-202ENST00000540608 SGK1O00141 431 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 C2CD2LO14523 706 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 PSEN1P49768 467 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 PIGHQ14442 188 aaPredicted RBP12.94□□□□□ -0.34
NPC1-202ENST00000540608 HIF1AQ16665 826 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 WASHC2DQ5SRD0 308 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 DEFB132Q7Z7B7 95 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 CCDC60Q8IWA6 550 aaPredicted RBP12.94□□□□□ -0.34
NPC1-202ENST00000540608 SLC35B2Q8TB61 432 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 STK32AQ8WU08 396 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 MRRFQ96E11 262 aaKnown RBP12.94□□□□□ -0.34
NPC1-202ENST00000540608 ZBTB45Q96K62 511 aaPredicted RBP12.94□□□□□ -0.34
NPC1-202ENST00000540608 MCEEQ96PE7 176 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 PHACTR1Q9C0D0 580 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 SAR1AQ9NR31 198 aa12.94□□□□□ -0.34
NPC1-202ENST00000540608 RPL26L1Q9UNX3 145 aaKnown RBP12.94□□□□□ -0.34
NPC1-202ENST00000540608 LUC7L3O95232 432 aaKnown RBP12.93□□□□□ -0.34
NPC1-202ENST00000540608 LSM8O95777 96 aaKnown RBP12.93□□□□□ -0.34
NPC1-202ENST00000540608 FGFR1P11362 822 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 PHBP35232 272 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 PLCB3Q01970 1234 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 OGDHQ02218 1023 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 TAP1Q03518 808 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 TAF11Q15544 211 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 TAF1BQ53T94 588 aaPredicted RBP12.93□□□□□ -0.34
NPC1-202ENST00000540608 TXNRD3NBQ6F5E7 133 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 DNAJC24Q6P3W2 148 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 DCUN1D2Q6PH85 259 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 ADGRD1Q6QNK2 874 aa12.93□□□□□ -0.34
NPC1-202ENST00000540608 ABHD15Q6UXT9 468 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms