RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 TRIM72Q6ZMU5 477 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 EP400NLQ6ZTU2 488 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 NT5DC3Q86UY8 548 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 SLC47A2Q86VL8 602 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 KRT222Q8N1A0 295 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 ACTRT1Q8TDG2 376 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 FAXDC2Q96IV6 333 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 NLRP4Q96MN2 994 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 PNKPQ96T60 521 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 INO80BQ9C086 356 aaPredicted RBP12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 THAP2Q9H0W7 228 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 PTPRHQ9HD43 1115 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 ALG13Q9NP73 1137 aaKnown RBP12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 CPSF3Q9UKF6 684 aaKnown RBP12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 CNTN6Q9UQ52 1028 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 SPTBN5Q9NRC6 3674 aaKnown RBP12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 A0A087WZ62 844 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 TBKBP1A7MCY6 615 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 C5orf67F2Z3F1 127 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 ABLIM1O14639 778 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 KCNK3O14649 394 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 GRM6O15303 877 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 VNN1O95497 513 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 EDN1P05305 212 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 ABCB4P21439 1286 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 CXCR5P32302 372 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 KCNQ1P51787 676 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 MBTD1Q05BQ5 628 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 C2orf54Q08AI8 447 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 CUL2Q13617 745 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 NCOA4Q13772 614 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 DSC3Q14574 896 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 LONRF2Q1L5Z9 754 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 SGSM1Q2NKQ1 1148 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 ACAD10Q6JQN1 1059 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 HDXQ7Z353 690 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 ZBTB33Q86T24 672 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 RNF169Q8NCN4 708 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 ADAMTS19Q8TE59 1207 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 DDX1Q92499 740 aaKnown RBP12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 HES6Q96HZ4 224 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 FDXACB1Q9BRP7 624 aaPredicted RBP12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 PLVAPQ9BX97 442 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 TMEM161AQ9NX61 479 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 TAS2R14Q9NYV8 317 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 UVRAGQ9P2Y5 699 aa12.73□□□□□ -0.37
CYB561A3-215ENST00000540317 XIRP2A4UGR9 3374 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 MIF4GDA9UHW6 222 aaKnown RBP12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 BUB1BO60566 1050 aaPredicted RBP12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 CYP1A2P05177 515 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 MMEP08473 750 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 CLTAP09496 248 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 LINC00271P0C7V0 271 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 MYBL1P10243 752 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 MCF2P10911 925 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 FGFR1P11362 822 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 BMP1P13497 986 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 VSNL1P62760 191 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 TNNC1P63316 161 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 FAM189BP81408 668 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 CLEC16AQ2KHT3 1053 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 ZNF568Q3ZCX4 644 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 TIGD5Q53EQ6 642 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 BEND6Q5SZJ8 279 aaPredicted RBP12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 APBB1IPQ7Z5R6 666 aaPredicted RBP12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 ZNF410Q86VK4 478 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 RPS6KC1Q96S38 1066 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 PCDHB18PQ96TA0 734 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 PSMB7Q99436 277 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 NAP1L3Q99457 506 aaPredicted RBP12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 PI4K2AQ9BTU6 479 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 CTTNBP2NLQ9P2B4 639 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 GTF3C4Q9UKN8 822 aa12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 TTC7AQ9ULT0 858 aaPredicted RBP12.72□□□□□ -0.37
CYB561A3-215ENST00000540317 PGRMC1O00264 195 aaKnown RBP12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 TNNC2P02585 160 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 HARSP12081 509 aaKnown RBP12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 WNT7BP56706 349 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 YWHAEP62258 255 aaKnown RBP12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 NOP14P78316 857 aaKnown RBP12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 GPS2Q13227 327 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 TRPC3Q13507 836 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 PPP2R5EQ16537 467 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 TCEAL5Q5H9L2 206 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 ZBTB41Q5SVQ8 909 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 TAF3Q5VWG9 929 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 LMBRD2Q68DH5 695 aaPredicted RBP12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 ABI1Q8IZP0 508 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 RASGEF1CQ8N431 466 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 KLHL23Q8NBE8 558 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 ANKRD36BP1Q96IX9 119 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 UHRF1Q96T88 793 aaPredicted RBP12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 ACBD3Q9H3P7 528 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 NSUN3Q9H649 340 aaKnown RBP12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 ELAC1Q9H777 363 aaKnown RBP12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 UBE2ZQ9H832 354 aaPredicted RBP12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 RPF1Q9H9Y2 349 aaKnown RBP12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 OSGEPQ9NPF4 335 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 AAASQ9NRG9 546 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 PCDHB12Q9Y5F1 795 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms