RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 WNT7BP56706 349 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 WDR72Q3MJ13 1102 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 HP1BP3Q5SSJ5 553 aaPredicted RBP10.19□□□□□ -0.78
CDH13-204ENST00000539548 CAPRIN2Q6IMN6 1127 aaKnown RBP10.19□□□□□ -0.78
CDH13-204ENST00000539548 RSBN1LQ6PCB5 846 aaPredicted RBP10.19□□□□□ -0.78
CDH13-204ENST00000539548 LVRNQ6Q4G3 990 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 KCNV2Q8TDN2 545 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 KCNN1Q92952 543 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 NUDCD1Q96RS6 583 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 ZNF341Q9BYN7 854 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 HOMER2Q9NSB8 354 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 KLHL11Q9NVR0 708 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 DDX56Q9NY93 547 aaKnown RBP10.19□□□□□ -0.78
CDH13-204ENST00000539548 AGO2Q9UKV8 859 aaKnown RBP10.19□□□□□ -0.78
CDH13-204ENST00000539548 IVNS1ABPQ9Y6Y0 642 aa10.19□□□□□ -0.78
CDH13-204ENST00000539548 TCRBV5S1A1TA0A578 114 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 TESPA1A2RU30 521 aaPredicted RBP10.18□□□□□ -0.78
CDH13-204ENST00000539548 CALB1P05937 261 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 FGFR1P11362 822 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 TCF4P15884 667 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 GM2AP17900 193 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 SSTR3P32745 418 aaPredicted RBP10.18□□□□□ -0.78
CDH13-204ENST00000539548 PHBP35232 272 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 ABL2P42684 1182 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 NLRP11P59045 1033 aaKnown RBP10.18□□□□□ -0.78
CDH13-204ENST00000539548 GPX6P59796 221 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 RNASELQ05823 741 aaKnown RBP10.18□□□□□ -0.78
CDH13-204ENST00000539548 ZNF252P-AS1Q0IIN9 211 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 GRIK3Q13003 919 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 TFDP3Q5H9I0 405 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 ARHGEF16Q5VV41 709 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 FYB2Q5VWT5 728 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 ADGRD1Q6QNK2 874 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 NLRP9Q7RTR0 991 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 FAM83AQ86UY5 434 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 CDAN1Q8IWY9 1227 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 SLC35B2Q8TB61 432 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 ZNF606Q8WXB4 792 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 LPAR1Q92633 364 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 AKT1S1Q96B36 256 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 GPRASP2Q96D09 838 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 SPDL1Q96EA4 605 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 GMLQ99445 158 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 DHRS4Q9BTZ2 278 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 TMEM39BQ9GZU3 492 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 POLR3FQ9H1D9 316 aaPredicted RBP10.18□□□□□ -0.78
CDH13-204ENST00000539548 PGAP2Q9UHJ9 254 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 ZFP69BQ9UJL9 534 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 ZMYND8Q9ULU4 1186 aaPredicted RBP10.18□□□□□ -0.78
CDH13-204ENST00000539548 FARP1Q9Y4F1 1045 aaPredicted RBP10.18□□□□□ -0.78
CDH13-204ENST00000539548 PTPRJQ12913 1337 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 ZNF541Q9H0D2 1346 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 LDHAP00338 332 aaKnown RBP10.18□□□□□ -0.78
CDH13-204ENST00000539548 LMNAP02545 664 aaKnown RBP10.18□□□□□ -0.78
CDH13-204ENST00000539548 PSAPP07602 524 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 KRT4P19013 534 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 EPHB2P29323 1055 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 CDKN2BP42772 138 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 ACOT2P49753 483 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 ZNF132P52740 706 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 RAD23BP54727 409 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 NOP14P78316 857 aaKnown RBP10.18□□□□□ -0.78
CDH13-204ENST00000539548 MAPK6Q16659 721 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 TAF1BQ53T94 588 aaPredicted RBP10.18□□□□□ -0.78
CDH13-204ENST00000539548 ZFYVE27Q5T4F4 411 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 CDCA2Q69YH5 1023 aaPredicted RBP10.18□□□□□ -0.78
CDH13-204ENST00000539548 SLFN12LQ6IEE8 588 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 VSIG10LQ86VR7 867 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 DHX37Q8IY37 1157 aaKnown RBP10.18□□□□□ -0.78
CDH13-204ENST00000539548 ZNF276Q8N554 614 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 UBR7Q8N806 425 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 FLAD1Q8NFF5 587 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 ASAP3Q8TDY4 903 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 MICAL1Q8TDZ2 1067 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 TUBB6Q9BUF5 446 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 VPS11Q9H270 941 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 CYP26B1Q9NR63 512 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 ANKFY1Q9P2R3 1169 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 NUB1Q9Y5A7 615 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 SNCAIPQ9Y6H5 919 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 KIAA1217Q5T5P2 1943 aa10.18□□□□□ -0.78
CDH13-204ENST00000539548 F8VP50 259 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 SGK1O00141 431 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 TM9SF1O15321 606 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 CBX6O95503 412 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 LSM8O95777 96 aaKnown RBP10.17□□□□□ -0.78
CDH13-204ENST00000539548 PIGRP01833 764 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 TROVE2P10155 538 aaKnown RBP eCLIP10.17□□□□□ -0.78
CDH13-204ENST00000539548 ATP6V1C1P21283 382 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 MARK3P27448 753 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 CCND2P30279 289 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 TAP1Q03518 808 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 PIGHQ14442 188 aaPredicted RBP10.17□□□□□ -0.78
CDH13-204ENST00000539548 HIF1AQ16665 826 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 CTC1Q2NKJ3 1217 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 SWSAP1Q6NVH7 229 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 ZNF449Q6P9G9 518 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 CAPN12Q6ZSI9 719 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 CLNKQ7Z7G1 428 aa10.17□□□□□ -0.78
CDH13-204ENST00000539548 MTDHQ86UE4 582 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms