RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 CBWD6Q4V339 395 aa16.08■□□□□ 0.16
PRPF19-203ENST00000539180 DCAF17Q5H9S7 520 aaPredicted RBP16.08■□□□□ 0.16
PRPF19-203ENST00000539180 CBWD3Q5JTY5 395 aa16.08■□□□□ 0.16
PRPF19-203ENST00000539180 CBWD5Q5RIA9 395 aa16.08■□□□□ 0.16
PRPF19-203ENST00000539180 ATAT1Q5SQI0 421 aa16.08■□□□□ 0.16
PRPF19-203ENST00000539180 KRT39Q6A163 491 aa16.08■□□□□ 0.16
PRPF19-203ENST00000539180 LRRTM3Q86VH5 581 aa16.08■□□□□ 0.16
PRPF19-203ENST00000539180 TTC9BQ8N6N2 239 aa16.08■□□□□ 0.16
PRPF19-203ENST00000539180 MRPL45Q9BRJ2 306 aaKnown RBP16.08■□□□□ 0.16
PRPF19-203ENST00000539180 SMYD3Q9H7B4 428 aa16.08■□□□□ 0.16
PRPF19-203ENST00000539180 METTL14Q9HCE5 456 aaKnown RBP16.08■□□□□ 0.16
PRPF19-203ENST00000539180 WDR6Q9NNW5 1121 aaKnown RBP16.08■□□□□ 0.16
PRPF19-203ENST00000539180 TMLHEQ9NVH6 421 aa16.08■□□□□ 0.16
PRPF19-203ENST00000539180 POLIQ9UNA4 740 aa16.08■□□□□ 0.16
PRPF19-203ENST00000539180 GREB1Q4ZG55 1949 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 LRRN2O75325 713 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 ACAT1P24752 427 aaKnown RBP16.07■□□□□ 0.16
PRPF19-203ENST00000539180 ASPAP45381 313 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 NOP14P78316 857 aaKnown RBP16.07■□□□□ 0.16
PRPF19-203ENST00000539180 SMARCB1Q12824 385 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 SLC39A12Q504Y0 691 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 ZNF667Q5HYK9 610 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 CCDC183Q5T5S1 534 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 TRIM59Q8IWR1 403 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 ATAD1Q8NBU5 361 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 SPPL2BQ8TCT7 592 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 C2orf15Q8WU43 125 aaKnown RBP16.07■□□□□ 0.16
PRPF19-203ENST00000539180 ELMO3Q96BJ8 720 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 SDCBP2Q9H190 292 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 MMRN2Q9H8L6 949 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 APOBEC3GQ9HC16 384 aaKnown RBP16.07■□□□□ 0.16
PRPF19-203ENST00000539180 TMEM63CQ9P1W3 806 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 USTQ9Y2C2 406 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 COQ4Q9Y3A0 265 aa16.07■□□□□ 0.16
PRPF19-203ENST00000539180 DENND4CQ5VZ89 1909 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 PRRG1O14668 218 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 CCL16O15467 120 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 STX10O60499 249 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 XYLBO75191 536 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 PCSK1P29120 753 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 ELF1P32519 619 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 TSPY1Q01534 308 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 SGSM1Q2NKQ1 1148 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 TCERG1LQ5VWI1 586 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 SPOPLQ6IQ16 392 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 FAM171BQ6P995 826 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 SCARA5Q6ZMJ2 495 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 DCP1BQ8IZD4 617 aaKnown RBP16.06■□□□□ 0.16
PRPF19-203ENST00000539180 FBXL13Q8NEE6 735 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 SEMA4DQ92854 862 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 MMS19Q96T76 1030 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 SYT15Q9BQS2 421 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 PI4K2AQ9BTU6 479 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 BCO2Q9BYV7 579 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 DNAJC25Q9H1X3 360 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 CRTAC1Q9NQ79 661 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 NXF1Q9UBU9 619 aaKnown RBP16.06■□□□□ 0.16
PRPF19-203ENST00000539180 CDH9Q9ULB4 789 aa16.06■□□□□ 0.16
PRPF19-203ENST00000539180 C2CD4DB7Z1M9 353 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 PMM2O15305 246 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 N4BP1O75113 896 aaKnown RBP16.05■□□□□ 0.16
PRPF19-203ENST00000539180 GNA14O95837 355 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 LRG1P02750 347 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 ATF6P18850 670 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 LMO2P25791 158 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 ERCC5P28715 1186 aaPredicted RBP16.05■□□□□ 0.16
PRPF19-203ENST00000539180 RAP1GAPP47736 663 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 TWF1Q12792 350 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 DUSP4Q13115 394 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 NFE2Q16621 373 aaPredicted RBP16.05■□□□□ 0.16
PRPF19-203ENST00000539180 CFAP221Q4G0U5 840 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 CCDC40Q4G0X9 1142 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 GRASPQ7Z6J2 395 aaPredicted RBP16.05■□□□□ 0.16
PRPF19-203ENST00000539180 GJD3Q8N144 294 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 SRRTQ9BXP5 876 aaKnown RBP16.05■□□□□ 0.16
PRPF19-203ENST00000539180 IMPG2Q9BZV3 1241 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 NIF3L1Q9GZT8 377 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 ABCB6Q9NP58 842 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 AVENQ9NQS1 362 aaPredicted RBP16.05■□□□□ 0.16
PRPF19-203ENST00000539180 HCFC1R1Q9NWW0 138 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 CEP72Q9P209 647 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 DNMT3BQ9UBC3 853 aaKnown RBP16.05■□□□□ 0.16
PRPF19-203ENST00000539180 DACH1Q9UI36 760 aa16.05■□□□□ 0.16
PRPF19-203ENST00000539180 NUP210Q8TEM1 1887 aaPredicted RBP16.05■□□□□ 0.16
PRPF19-203ENST00000539180 CUL9Q8IWT3 2517 aa16.04■□□□□ 0.16
PRPF19-203ENST00000539180 MYBPHLA2RUH7 354 aa16.04■□□□□ 0.16
PRPF19-203ENST00000539180 FMO5P49326 533 aa16.04■□□□□ 0.16
PRPF19-203ENST00000539180 EPHA5P54756 1037 aa16.04■□□□□ 0.16
PRPF19-203ENST00000539180 PSMC1P62191 440 aaKnown RBP16.04■□□□□ 0.16
PRPF19-203ENST00000539180 NTHL1P78549 312 aa16.04■□□□□ 0.16
PRPF19-203ENST00000539180 INCA1Q0VD86 236 aa16.04■□□□□ 0.16
PRPF19-203ENST00000539180 PLD1Q13393 1074 aa16.04■□□□□ 0.16
PRPF19-203ENST00000539180 CT47A1Q5JQC4 288 aaPredicted RBP16.04■□□□□ 0.16
PRPF19-203ENST00000539180 IRF2BP1Q8IU81 584 aa16.04■□□□□ 0.16
PRPF19-203ENST00000539180 FUBP3Q96I24 572 aaKnown RBP eCLIP16.04■□□□□ 0.16
PRPF19-203ENST00000539180 FAXDC2Q96IV6 333 aa16.04■□□□□ 0.16
PRPF19-203ENST00000539180 RPGRIP1Q96KN7 1286 aa16.04■□□□□ 0.16
PRPF19-203ENST00000539180 CNOT6LQ96LI5 555 aaKnown RBP16.04■□□□□ 0.16
PRPF19-203ENST00000539180 DPEP3Q9H4B8 488 aa16.04■□□□□ 0.16
PRPF19-203ENST00000539180 PIDD1Q9HB75 910 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms