RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 MANSC1Q9H8J5 431 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 CD209Q9NNX6 404 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 SH3GLB2Q9NR46 395 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 SOX13Q9UN79 622 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 SORCS3Q9UPU3 1222 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 PTPN22Q9Y2R2 807 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 TBKBP1A7MCY6 615 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 FBXO21O94952 628 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 CHKAP35790 457 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 ACADSBP45954 432 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 PDE1CQ14123 709 aaPredicted RBP13.03□□□□□ -0.32
USP3-203ENST00000538686 ARHGEF6Q15052 776 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 TCEAL1Q15170 157 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 SEC23AQ15436 765 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 SLC1A5Q15758 541 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 ZNF530Q6P9A1 599 aaPredicted RBP13.03□□□□□ -0.32
USP3-203ENST00000538686 VASH1Q7L8A9 365 aaPredicted RBP13.03□□□□□ -0.32
USP3-203ENST00000538686 BLIDQ8IZY5 108 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 SLC26A7Q8TE54 656 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 PYDC1Q8WXC3 89 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 GCNAQ96QF7 691 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 PLIN2Q99541 437 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 PSD2Q9BQI7 771 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 PLVAPQ9BX97 442 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 TDRD1Q9BXT4 1180 aaKnown RBP13.03□□□□□ -0.32
USP3-203ENST00000538686 WNT8AQ9H1J5 351 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 PARVGQ9HBI0 331 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 FBXO6Q9NRD1 293 aaPredicted RBP13.03□□□□□ -0.32
USP3-203ENST00000538686 KCNK4Q9NYG8 393 aa13.03□□□□□ -0.32
USP3-203ENST00000538686 BCORQ6W2J9 1755 aa13.02□□□□□ -0.32
USP3-203ENST00000538686 USP54Q70EL1 1684 aa13.02□□□□□ -0.32
USP3-203ENST00000538686 IDH3BO43837 385 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 DLDP09622 509 aaKnown RBP13.02□□□□□ -0.33
USP3-203ENST00000538686 ALDH1A3P47895 512 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 SLC5A3P53794 718 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 DLG4P78352 724 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 KRT17Q04695 432 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 BTKQ06187 659 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 WASHC5Q12768 1159 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 KCNJ8Q15842 424 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 LRRC24Q50LG9 513 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 DCAF6Q58WW2 860 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 WDR45BQ5MNZ6 344 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 PPP4R3CPQ6ZMV5 832 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 TXNDC2Q86VQ3 553 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 SLC13A5Q86YT5 568 aaPredicted RBP13.02□□□□□ -0.33
USP3-203ENST00000538686 MMAAQ8IVH4 418 aaKnown RBP13.02□□□□□ -0.33
USP3-203ENST00000538686 RTKN2Q8IZC4 609 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 SLC43A3Q8NBI5 491 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 TSPAN14Q8NG11 270 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 RBM15Q96T37 977 aaKnown RBP eCLIP13.02□□□□□ -0.33
USP3-203ENST00000538686 ZKSCAN3Q9BRR0 538 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 KIAA1586Q9HCI6 787 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 OSGEPQ9NPF4 335 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 OLFML3Q9NRN5 406 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 NCKIPSDQ9NZQ3 722 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 SLC24A2Q9UI40 661 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 ANAPC5Q9UJX4 755 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 AP4B1Q9Y6B7 739 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 CNTNAP5Q8WYK1 1306 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 ZNF532Q9HCE3 1301 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.33
USP3-203ENST00000538686 ARFGEF2Q9Y6D5 1785 aa13.02□□□□□ -0.33
USP3-203ENST00000538686 CCDC194A0A1B0GVG4 234 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 TP73O15350 636 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 TEX28O15482 410 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 CRTAMO95727 393 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 S100BP04271 92 aaPredicted RBP13.01□□□□□ -0.33
USP3-203ENST00000538686 CHRNB1P11230 501 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 ATF2P15336 505 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 PIK3CAP42336 1068 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 KRT6CP48668 564 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 HIRAP54198 1017 aaPredicted RBP13.01□□□□□ -0.33
USP3-203ENST00000538686 ATP6V0D1P61421 351 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 ESRRGP62508 458 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 ZNF200P98182 395 aaPredicted RBP13.01□□□□□ -0.33
USP3-203ENST00000538686 EIF2B5Q13144 721 aaKnown RBP13.01□□□□□ -0.33
USP3-203ENST00000538686 PFKFB3Q16875 520 aaPredicted RBP13.01□□□□□ -0.33
USP3-203ENST00000538686 C1orf141Q5JVX7 400 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 NOP9Q86U38 636 aaKnown RBP13.01□□□□□ -0.33
USP3-203ENST00000538686 CHSY1Q86X52 802 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 LSMEM2Q8N112 164 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 SLC30A5Q8TAD4 765 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 LRRC15Q8TF66 581 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 THAP11Q96EK4 314 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 RANBP9Q96S59 729 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 KCNK13Q9HB14 408 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 MOV10Q9HCE1 1003 aaKnown RBP13.01□□□□□ -0.33
USP3-203ENST00000538686 MAN1C1Q9NR34 630 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 EXOC7Q9UPT5 735 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 INPP5FQ9Y2H2 1132 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 TNKSO95271 1327 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 GSTTP1A0A1W2PQM5 241 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 ANKRD62A6NC57 917 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 ENO1P06733 434 aaKnown RBP13.01□□□□□ -0.33
USP3-203ENST00000538686 ALOX5P09917 674 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 TFPTP0C1Z6 253 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 POLR2MP0CAP2 368 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 TATP17735 454 aaPredicted RBP13.01□□□□□ -0.33
USP3-203ENST00000538686 JAK1P23458 1154 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms