RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 ZKSCAN4Q969J2 545 aaPredicted RBP17.54■□□□□ 0.4
SCARB1-205ENST00000538291 ZFYVE19Q96K21 471 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 TSC22D3Q99576 134 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 GLI2P10070 1586 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 TCP11X1B4DZS4 312 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 GRIN1Q05586 938 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 PTK7Q13308 1070 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 TTLL9Q3SXZ7 439 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 ZNF555Q8NEP9 628 aa17.54■□□□□ 0.4
SCARB1-205ENST00000538291 PRPF18Q99633 342 aaKnown RBP17.54■□□□□ 0.4
SCARB1-205ENST00000538291 B3GAT3O94766 335 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 PI4K2AQ9BTU6 479 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 GOLPH3Q9H4A6 298 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 MROH8Q9H579 483 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 KLK14Q9P0G3 267 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 CDC42BPAQ5VT25 1732 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 USP27XA6NNY8 438 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 MAN1A2O60476 641 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 FKBP9O95302 570 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 RPLP2P05387 115 aaKnown RBP17.53■□□□□ 0.4
SCARB1-205ENST00000538291 ENO1P06733 434 aaKnown RBP17.53■□□□□ 0.4
SCARB1-205ENST00000538291 CAP2P40123 477 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 FKBP9P1Q75LS8 142 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 KCNV2Q8TDN2 545 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 L3MBTL3Q96JM7 780 aaPredicted RBP17.53■□□□□ 0.4
SCARB1-205ENST00000538291 RPRD1AQ96P16 312 aaPredicted RBP17.53■□□□□ 0.4
SCARB1-205ENST00000538291 ADAM33Q9BZ11 813 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 STN1Q9H668 368 aaKnown RBP17.53■□□□□ 0.4
SCARB1-205ENST00000538291 ARL2BPQ9Y2Y0 163 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 SNRPAP09012 282 aaKnown RBP17.53■□□□□ 0.4
SCARB1-205ENST00000538291 CENPCQ03188 943 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 MS4A14Q96JA4 679 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 BRD8Q9H0E9 1235 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 AGPAT5Q9NUQ2 364 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 TMA16Q96EY4 203 aaKnown RBP17.53■□□□□ 0.4
SCARB1-205ENST00000538291 WDCPQ9H6R7 721 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 DDIT4Q9NX09 232 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 SPATA31A5Q5VU36 1347 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 SPATA31A7Q8IWB4 1347 aa17.53■□□□□ 0.4
SCARB1-205ENST00000538291 SRP72O76094 671 aaKnown RBP17.52■□□□□ 0.4
SCARB1-205ENST00000538291 RAP1GDS1P52306 607 aa17.52■□□□□ 0.4
SCARB1-205ENST00000538291 PPP4CP60510 307 aa17.52■□□□□ 0.4
SCARB1-205ENST00000538291 UGT3A1Q6NUS8 523 aa17.52■□□□□ 0.4
SCARB1-205ENST00000538291 LRRC8BQ6P9F7 803 aa17.52■□□□□ 0.4
SCARB1-205ENST00000538291 PCSK9Q8NBP7 692 aaKnown RBP17.52■□□□□ 0.4
SCARB1-205ENST00000538291 CD163L1Q9NR16 1453 aa17.52■□□□□ 0.4
SCARB1-205ENST00000538291 OGTO15294 1046 aa17.52■□□□□ 0.4
SCARB1-205ENST00000538291 MAGEA9P43362 315 aa17.52■□□□□ 0.4
SCARB1-205ENST00000538291 SMTNL2Q2TAL5 461 aa17.52■□□□□ 0.4
SCARB1-205ENST00000538291 SGSM3Q96HU1 749 aa17.52■□□□□ 0.4
SCARB1-205ENST00000538291 ADARB2Q9NS39 739 aaKnown RBP17.52■□□□□ 0.4
SCARB1-205ENST00000538291 SETD1BQ9UPS6 1966 aaKnown RBP17.52■□□□□ 0.4
SCARB1-205ENST00000538291 AP1G2O75843 785 aa17.52■□□□□ 0.4
SCARB1-205ENST00000538291 ZFP42Q96MM3 310 aa17.52■□□□□ 0.4
SCARB1-205ENST00000538291 VPS33BQ9H267 617 aa17.52■□□□□ 0.4
SCARB1-205ENST00000538291 CDYLQ9Y232 598 aa17.52■□□□□ 0.4
SCARB1-205ENST00000538291 F5H5T6 163 aa17.52■□□□□ 0.39
SCARB1-205ENST00000538291 EPB42P16452 691 aa17.52■□□□□ 0.39
SCARB1-205ENST00000538291 MZF1P28698 734 aaPredicted RBP17.52■□□□□ 0.39
SCARB1-205ENST00000538291 HNRNPH2P55795 449 aaKnown RBP17.52■□□□□ 0.39
SCARB1-205ENST00000538291 ZNF669Q96BR6 464 aaPredicted RBP17.52■□□□□ 0.39
SCARB1-205ENST00000538291 PRMT1Q99873 361 aaKnown RBP17.52■□□□□ 0.39
SCARB1-205ENST00000538291 FRMD8Q9BZ67 464 aaPredicted RBP17.52■□□□□ 0.39
SCARB1-205ENST00000538291 M0QYT0 321 aa17.52■□□□□ 0.39
SCARB1-205ENST00000538291 ENO3P13929 434 aaPredicted RBP17.52■□□□□ 0.39
SCARB1-205ENST00000538291 ACO1P21399 889 aaKnown RBP17.52■□□□□ 0.39
SCARB1-205ENST00000538291 PLA2G4AP47712 749 aa17.52■□□□□ 0.39
SCARB1-205ENST00000538291 TP53BP2Q13625 1128 aa17.52■□□□□ 0.39
SCARB1-205ENST00000538291 LONRF1Q17RB8 773 aa17.52■□□□□ 0.39
SCARB1-205ENST00000538291 RFX8Q6ZV50 586 aa17.52■□□□□ 0.39
SCARB1-205ENST00000538291 CDR2LQ86X02 465 aaPredicted RBP17.52■□□□□ 0.39
SCARB1-205ENST00000538291 C4orf33Q8N1A6 199 aa17.52■□□□□ 0.39
SCARB1-205ENST00000538291 ENTPD7Q9NQZ7 604 aa17.52■□□□□ 0.39
SCARB1-205ENST00000538291 H2AFY2Q9P0M6 372 aaPredicted RBP17.52■□□□□ 0.39
SCARB1-205ENST00000538291 SLC25A13Q9UJS0 675 aa17.52■□□□□ 0.39
SCARB1-205ENST00000538291 ADGRA2Q96PE1 1338 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 ZNF185O15231 689 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 HNRNPRO43390 633 aaKnown RBP17.51■□□□□ 0.39
SCARB1-205ENST00000538291 TRIM16O95361 564 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 DNAL1Q4LDG9 190 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 E4F1Q66K89 784 aaPredicted RBP17.51■□□□□ 0.39
SCARB1-205ENST00000538291 WDR24Q96S15 920 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 TTLL13PA6NNM8 815 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 MSH4O15457 936 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 H2AFYO75367 372 aaKnown RBP17.51■□□□□ 0.39
SCARB1-205ENST00000538291 ASS1P00966 412 aaKnown RBP17.51■□□□□ 0.39
SCARB1-205ENST00000538291 PDHA1P08559 390 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 RAD23BP54727 409 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 CUL2Q13617 745 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 GLRA4Q5JXX5 417 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 KLHDC7AQ5VTJ3 777 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 LRIG3Q6UXM1 1119 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 C3orf62Q6ZUJ4 267 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 TFB1MQ8WVM0 346 aaKnown RBP17.51■□□□□ 0.39
SCARB1-205ENST00000538291 TUBE1Q9UJT0 475 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 GRID1Q9ULK0 1009 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 MYO1GB0I1T2 1018 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 MBL2P11226 248 aaPredicted RBP17.51■□□□□ 0.39
SCARB1-205ENST00000538291 ANTXR2P58335 489 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 ADNPQ9H2P0 1102 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms