RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 ASB16Q96NS5 453 aa23.06■■□□□ 1.28
CCDC78-215ENST00000538176 LRRC3Q9BY71 257 aa23.06■■□□□ 1.28
CCDC78-215ENST00000538176 DNAJC25Q9H1X3 360 aa23.06■■□□□ 1.28
CCDC78-215ENST00000538176 TRPV4Q9HBA0 871 aa23.06■■□□□ 1.28
CCDC78-215ENST00000538176 ABCB6Q9NP58 842 aa23.06■■□□□ 1.28
CCDC78-215ENST00000538176 DDX43Q9NXZ2 648 aaKnown RBP23.06■■□□□ 1.28
CCDC78-215ENST00000538176 SIX4Q9UIU6 781 aa23.06■■□□□ 1.28
CCDC78-215ENST00000538176 CA14Q9ULX7 337 aa23.06■■□□□ 1.28
CCDC78-215ENST00000538176 PDXKO00764 312 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 HOXD11P31277 338 aaPredicted RBP23.05■■□□□ 1.28
CCDC78-215ENST00000538176 CCR2P41597 374 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 CYP2J2P51589 502 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 CYP24A1Q07973 514 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 TCF15Q12870 199 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 STK4Q13043 487 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 TAF12Q16514 161 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 FAM78AQ5JUQ0 283 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 TRAPPC11Q7Z392 1133 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 LRRTM3Q86VH5 581 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 GRAMD1CQ8IYS0 662 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 OR5B17Q8NGF7 314 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 FAM200AQ8TCP9 573 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 DEPDC1BQ8WUY9 529 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 CGRRF1Q99675 332 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 SEPT5Q99719 369 aaPredicted RBP23.05■■□□□ 1.28
CCDC78-215ENST00000538176 KXD1Q9BQD3 176 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 L1RE1Q9UN81 338 aa23.05■■□□□ 1.28
CCDC78-215ENST00000538176 GABRDO14764 452 aa23.04■■□□□ 1.28
CCDC78-215ENST00000538176 DLATP10515 647 aaKnown RBP23.04■■□□□ 1.28
CCDC78-215ENST00000538176 HAPLN1P10915 354 aaPredicted RBP23.04■■□□□ 1.28
CCDC78-215ENST00000538176 NDUFA8P51970 172 aa23.04■■□□□ 1.28
CCDC78-215ENST00000538176 SLC44A4Q53GD3 710 aa23.04■■□□□ 1.28
CCDC78-215ENST00000538176 ARHGAP15Q53QZ3 475 aa23.04■■□□□ 1.28
CCDC78-215ENST00000538176 TANGO2Q6ICL3 276 aa23.04■■□□□ 1.28
CCDC78-215ENST00000538176 TMC8Q8IU68 726 aa23.04■■□□□ 1.28
CCDC78-215ENST00000538176 DNASE1L2Q92874 299 aa23.04■■□□□ 1.28
CCDC78-215ENST00000538176 NELL2Q99435 816 aa23.04■■□□□ 1.28
CCDC78-215ENST00000538176 TBC1D17Q9HA65 648 aa23.04■■□□□ 1.28
CCDC78-215ENST00000538176 SIT1Q9Y3P8 196 aa23.04■■□□□ 1.28
CCDC78-215ENST00000538176 TSC2P49815 1807 aa23.03■■□□□ 1.28
CCDC78-215ENST00000538176 SOBPA7XYQ1 873 aa23.03■■□□□ 1.28
CCDC78-215ENST00000538176 MOSPD3O75425 235 aa23.03■■□□□ 1.28
CCDC78-215ENST00000538176 RPN1P04843 607 aaKnown RBP23.03■■□□□ 1.28
CCDC78-215ENST00000538176 PSMC3P17980 439 aa23.03■■□□□ 1.28
CCDC78-215ENST00000538176 CDC25CP30307 473 aa23.03■■□□□ 1.28
CCDC78-215ENST00000538176 MAPRE1Q15691 268 aaKnown RBP23.03■■□□□ 1.28
CCDC78-215ENST00000538176 INTS6LQ5JSJ4 861 aaKnown RBP23.03■■□□□ 1.28
CCDC78-215ENST00000538176 LIMS2Q7Z4I7 341 aa23.03■■□□□ 1.28
CCDC78-215ENST00000538176 ADGRF2Q8IZF7 708 aa23.03■■□□□ 1.28
CCDC78-215ENST00000538176 FSIP1Q8NA03 581 aa23.03■■□□□ 1.28
CCDC78-215ENST00000538176 IRF7Q92985 503 aa23.03■■□□□ 1.28
CCDC78-215ENST00000538176 CCDC127Q96BQ5 260 aa23.03■■□□□ 1.28
CCDC78-215ENST00000538176 FUBP3Q96I24 572 aaKnown RBP eCLIP23.03■■□□□ 1.28
CCDC78-215ENST00000538176 GCNAQ96QF7 691 aa23.03■■□□□ 1.28
CCDC78-215ENST00000538176 TRMT61BQ9BVS5 477 aaKnown RBP23.03■■□□□ 1.28
CCDC78-215ENST00000538176 OSBPL6Q9BZF3 934 aa23.03■■□□□ 1.28
CCDC78-215ENST00000538176 SLITRK6Q9H5Y7 841 aa23.03■■□□□ 1.28
CCDC78-215ENST00000538176 TRPV5Q9NQA5 729 aa23.03■■□□□ 1.28
CCDC78-215ENST00000538176 ABI2Q9NYB9 513 aaPredicted RBP23.03■■□□□ 1.28
CCDC78-215ENST00000538176 A0A1W2PRU2 124 aa23.02■■□□□ 1.28
CCDC78-215ENST00000538176 RHOBTB3O94955 611 aa23.02■■□□□ 1.28
CCDC78-215ENST00000538176 STAU1O95793 577 aaKnown RBP23.02■■□□□ 1.28
CCDC78-215ENST00000538176 WEE1P30291 646 aa23.02■■□□□ 1.28
CCDC78-215ENST00000538176 ATICP31939 592 aa23.02■■□□□ 1.28
CCDC78-215ENST00000538176 RPL10AP62906 217 aaKnown RBP23.02■■□□□ 1.28
CCDC78-215ENST00000538176 TRPC3Q13507 836 aa23.02■■□□□ 1.28
CCDC78-215ENST00000538176 TEAD2Q15562 447 aa23.02■■□□□ 1.28
CCDC78-215ENST00000538176 MLF2Q15773 248 aaPredicted RBP23.02■■□□□ 1.28
CCDC78-215ENST00000538176 SOWAHAQ2M3V2 549 aa23.02■■□□□ 1.28
CCDC78-215ENST00000538176 LMBRD2Q68DH5 695 aaPredicted RBP23.02■■□□□ 1.28
CCDC78-215ENST00000538176 KRBA2Q6ZNG9 492 aa23.02■■□□□ 1.28
CCDC78-215ENST00000538176 CCDC105Q8IYK2 499 aa23.02■■□□□ 1.28
CCDC78-215ENST00000538176 KIAA0895Q8NCT3 520 aa23.02■■□□□ 1.28
CCDC78-215ENST00000538176 SHKBP1Q8TBC3 707 aa23.02■■□□□ 1.28
CCDC78-215ENST00000538176 ZSCAN18Q8TBC5 510 aaPredicted RBP23.02■■□□□ 1.28
CCDC78-215ENST00000538176 ATXN3LQ9H3M9 355 aa23.02■■□□□ 1.28
CCDC78-215ENST00000538176 DMAC2Q9NW81 257 aa23.02■■□□□ 1.28
CCDC78-215ENST00000538176 KANSL1LA0AUZ9 987 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 GOLGA6L4A6NEF3 574 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 PI15O43692 258 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 CALUO43852 315 aaPredicted RBP23.01■■□□□ 1.27
CCDC78-215ENST00000538176 ZNF202O95125 648 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 CSH1P0DML2 217 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 CSH2P0DML3 217 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 FCARP24071 287 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 SNW1Q13573 536 aaKnown RBP23.01■■□□□ 1.27
CCDC78-215ENST00000538176 KCNB1Q14721 858 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 CFAP221Q4G0U5 840 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 C4orf50Q6ZRC1 276 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 MFSD6LQ8IWD5 586 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 ST13P5Q8NFI4 369 aaPredicted RBP23.01■■□□□ 1.27
CCDC78-215ENST00000538176 ATOH1Q92858 354 aaPredicted RBP23.01■■□□□ 1.27
CCDC78-215ENST00000538176 CEP295NLQ96MC4 621 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 DDX23Q9BUQ8 820 aaKnown RBP23.01■■□□□ 1.27
CCDC78-215ENST00000538176 KCTD10Q9H3F6 313 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 BRD9Q9H8M2 597 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 OBP2AQ9NY56 170 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 CDH9Q9ULB4 789 aa23.01■■□□□ 1.27
CCDC78-215ENST00000538176 MRPS17Q9Y2R5 130 aaKnown RBP23.01■■□□□ 1.27
CCDC78-215ENST00000538176 PTPRJQ12913 1337 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms