RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 EMC10Q5UCC4 262 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 ADAT2Q7Z6V5 191 aaKnown RBP11.4□□□□□ -0.58
CLIP1-210ENST00000538120 RASAL3Q86YV0 1011 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 WHAMMQ8TF30 809 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 CELF4Q9BZC1 486 aaKnown RBP11.4□□□□□ -0.58
CLIP1-210ENST00000538120 CD248Q9HCU0 757 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 SETD4Q9NVD3 440 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 ANAPC7Q9UJX3 599 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 POLIQ9UNA4 740 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 GNEQ9Y223 722 aaKnown RBP11.4□□□□□ -0.58
CLIP1-210ENST00000538120 NFS1Q9Y697 457 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 EVPLQ92817 2033 aa11.4□□□□□ -0.58
CLIP1-210ENST00000538120 A6NNZ2 444 aa11.4□□□□□ -0.59
CLIP1-210ENST00000538120 DCDC2CA8MYV0 355 aa11.4□□□□□ -0.59
CLIP1-210ENST00000538120 TSPAN1O60635 241 aa11.4□□□□□ -0.59
CLIP1-210ENST00000538120 TNNC2P02585 160 aa11.4□□□□□ -0.59
CLIP1-210ENST00000538120 TNFAIP2Q03169 654 aa11.4□□□□□ -0.59
CLIP1-210ENST00000538120 MAP2K5Q13163 448 aa11.4□□□□□ -0.59
CLIP1-210ENST00000538120 QPCTQ16769 361 aa11.4□□□□□ -0.59
CLIP1-210ENST00000538120 ZNF699Q32M78 642 aa11.4□□□□□ -0.59
CLIP1-210ENST00000538120 SLC10A6Q3KNW5 377 aa11.4□□□□□ -0.59
CLIP1-210ENST00000538120 TUBB8Q3ZCM7 444 aa11.4□□□□□ -0.59
CLIP1-210ENST00000538120 C1orf127Q8N9H9 656 aa11.4□□□□□ -0.59
CLIP1-210ENST00000538120 TRIM11Q96F44 468 aa11.4□□□□□ -0.59
CLIP1-210ENST00000538120 ANKRD36BP1Q96IX9 119 aa11.4□□□□□ -0.59
CLIP1-210ENST00000538120 C11orf70Q9BRQ4 267 aa11.4□□□□□ -0.59
CLIP1-210ENST00000538120 NMRK2Q9NPI5 230 aa11.4□□□□□ -0.59
CLIP1-210ENST00000538120 ZSWIM8A7E2V4 1837 aa11.39□□□□□ -0.59
CLIP1-210ENST00000538120 ZNF236Q9UL36 1845 aa11.39□□□□□ -0.59
CLIP1-210ENST00000538120 TCRBV7S2A1N4TA0A589 114 aa11.39□□□□□ -0.59
CLIP1-210ENST00000538120 HMGB1P1B2RPK0 211 aaPredicted RBP11.39□□□□□ -0.59
CLIP1-210ENST00000538120 TTI1O43156 1089 aa11.39□□□□□ -0.59
CLIP1-210ENST00000538120 DYNC1LI2O43237 492 aaPredicted RBP11.39□□□□□ -0.59
CLIP1-210ENST00000538120 SPOPO43791 374 aa11.39□□□□□ -0.59
CLIP1-210ENST00000538120 ZNF865P0CJ78 1059 aaPredicted RBP11.39□□□□□ -0.59
CLIP1-210ENST00000538120 JADE1Q6IE81 842 aa11.39□□□□□ -0.59
CLIP1-210ENST00000538120 ILDR2Q71H61 639 aa11.39□□□□□ -0.59
CLIP1-210ENST00000538120 PRELID2Q8N945 189 aa11.39□□□□□ -0.59
CLIP1-210ENST00000538120 PPP1R13LQ8WUF5 828 aa11.39□□□□□ -0.59
CLIP1-210ENST00000538120 NLRP7Q8WX94 980 aa11.39□□□□□ -0.59
CLIP1-210ENST00000538120 TFAP2BQ92481 460 aa11.39□□□□□ -0.59
CLIP1-210ENST00000538120 SEC14L1Q92503 715 aa11.39□□□□□ -0.59
CLIP1-210ENST00000538120 USP6NLQ92738 828 aa11.39□□□□□ -0.59
CLIP1-210ENST00000538120 CABS1Q96KC9 395 aa11.39□□□□□ -0.59
CLIP1-210ENST00000538120 ADAM22Q9P0K1 906 aa11.39□□□□□ -0.59
CLIP1-210ENST00000538120 ATXN2Q99700 1313 aaKnown RBP11.39□□□□□ -0.59
CLIP1-210ENST00000538120 ARHGAP33O14559 1287 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 FAM107AO95990 144 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 ANK1P16157 1881 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 FGFR4P22455 802 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 ZNF844Q08AG5 666 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 MAMLD1Q13495 774 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 HIC1Q14526 733 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 SIX1Q15475 284 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-210ENST00000538120 ZNF394Q53GI3 561 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 PLEKHA7Q6IQ23 1121 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 SCARA5Q6ZMJ2 495 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 WDTC1Q8N5D0 677 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 EIF1ADQ8N9N8 165 aaKnown RBP11.38□□□□□ -0.59
CLIP1-210ENST00000538120 LENG1Q96BZ8 264 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-210ENST00000538120 VCPIP1Q96JH7 1222 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 NAP1L3Q99457 506 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-210ENST00000538120 SDCBP2Q9H190 292 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 ADAMTS10Q9H324 1103 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 A0A1B0GUA9 196 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 CCL14Q16627 93 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 ZFYVE27Q5T4F4 411 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 DMRTA1Q5VZB9 504 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 OLFML2BQ68BL8 750 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 C6orf89Q6UWU4 347 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 CCDC13Q8IYE1 715 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 CCDC26Q8TAB7 109 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 BCO2Q9BYV7 579 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 SLC12A6Q9UHW9 1150 aa11.38□□□□□ -0.59
CLIP1-210ENST00000538120 TCRBV5S1A1TA0A578 114 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 GJB6O95452 261 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 MYZAPP0CAP1 466 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 MMP8P22894 467 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 PBX2P40425 430 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 PTGIRP43119 386 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 RAP1GAPP47736 663 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 ZNF157P51786 506 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-210ENST00000538120 RWDD2BP57060 319 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 ACTN3Q08043 901 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-210ENST00000538120 CLUL1Q15846 466 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 LIN9Q5TKA1 542 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 TTC27Q6P3X3 843 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 C17orf99Q6UX52 265 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 SLC13A5Q86YT5 568 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-210ENST00000538120 UBLCP1Q8WVY7 318 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-210ENST00000538120 MYCBPQ99417 103 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-210ENST00000538120 SLC5A4Q9NY91 659 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 NXF1Q9UBU9 619 aaKnown RBP11.37□□□□□ -0.59
CLIP1-210ENST00000538120 DDX20Q9UHI6 824 aaKnown RBP11.37□□□□□ -0.59
CLIP1-210ENST00000538120 MGAMO43451 1857 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 RRN3P2A6NIE6 340 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 DAPK3O43293 454 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 GPR32O75388 356 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 PROSCO94903 275 aa11.37□□□□□ -0.59
CLIP1-210ENST00000538120 F2P00734 622 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms