RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 I3L4J1 428 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 NRP1O14786 923 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 BAIAP3O94812 1187 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 KIF4AO95239 1232 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 FGBP02675 491 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 GALTP07902 379 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 CD19P15391 556 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 CDH5P33151 784 aaPredicted RBP12.47□□□□□ -0.41
SPARC-207ENST00000537849 OR1G1P47890 313 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 NOMO3P69849 1222 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 KIF5AQ12840 1032 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 PPIGQ13427 754 aaKnown RBP eCLIP12.47□□□□□ -0.41
SPARC-207ENST00000537849 TMEM240Q5SV17 173 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 KIAA0319Q5VV43 1072 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 DENND1BQ6P3S1 775 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 LCLAT1Q6UWP7 414 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 TRIM72Q6ZMU5 477 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 ZNF365Q70YC5 407 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 ACOT1Q86TX2 421 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 C7orf61Q8IZ16 206 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 ADGRF2Q8IZF7 708 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 C12orf29Q8N999 325 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 CPA5Q8WXQ8 436 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 RTP3Q9BQQ7 232 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 TMEM175Q9BSA9 504 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 LHX5Q9H2C1 402 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 SNX25Q9H3E2 840 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 DPEP3Q9H4B8 488 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 CWH43Q9H720 699 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 LUC7LQ9NQ29 371 aaKnown RBP12.47□□□□□ -0.41
SPARC-207ENST00000537849 SEPT11Q9NVA2 429 aaKnown RBP12.47□□□□□ -0.41
SPARC-207ENST00000537849 HCSTQ9UBK5 93 aa12.47□□□□□ -0.41
SPARC-207ENST00000537849 TIMM13Q9Y5L4 95 aaPredicted RBP12.47□□□□□ -0.41
SPARC-207ENST00000537849 A8MXQ7 604 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 O00370 1275 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 KRT86O43790 486 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 ATP2C2O75185 946 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 AMHP03971 560 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 TMEM253P0C7T8 217 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 TYMPP19971 482 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 LHX1P48742 406 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 SLC11A1P49279 550 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 FPGSQ05932 587 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 PTP4A2Q12974 167 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 PTPN14Q15678 1187 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 PAN2Q504Q3 1202 aaKnown RBP12.46□□□□□ -0.41
SPARC-207ENST00000537849 PKDCCQ504Y2 493 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 SGO2Q562F6 1265 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 COL13A1Q5TAT6 717 aaPredicted RBP12.46□□□□□ -0.41
SPARC-207ENST00000537849 ARHGAP17Q68EM7 881 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 OTOP2Q7RTS6 562 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 TMCO2Q7Z6W1 182 aaPredicted RBP12.46□□□□□ -0.41
SPARC-207ENST00000537849 SPATA18Q8TC71 538 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 ABHD8Q96I13 439 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 COLEC11Q9BWP8 271 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 MRPL9Q9BYD2 267 aaKnown RBP12.46□□□□□ -0.41
SPARC-207ENST00000537849 RC3H2Q9HBD1 1191 aaKnown RBP12.46□□□□□ -0.41
SPARC-207ENST00000537849 PRKAG2Q9UGJ0 569 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 GUCA1BQ9UMX6 200 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 PCDHB8Q9UN66 801 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 FAN1Q9Y2M0 1017 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 PAXBP1Q9Y5B6 917 aa12.46□□□□□ -0.41
SPARC-207ENST00000537849 VWA8A3KMH1 1905 aa12.46□□□□□ -0.42
SPARC-207ENST00000537849 MED7O43513 233 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 TADA2AO75478 443 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 MICAL2O94851 1124 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 EFEMP2O95967 443 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 PTPN1P18031 435 aaKnown RBP12.45□□□□□ -0.42
SPARC-207ENST00000537849 GPD2P43304 727 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 BCAR1P56945 870 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 ETF1P62495 437 aaKnown RBP12.45□□□□□ -0.42
SPARC-207ENST00000537849 GPC5P78333 572 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 CENPCQ03188 943 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 TCEAL1Q15170 157 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 ARHGAP29Q52LW3 1261 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 PPP1R26Q5T8A7 1209 aaPredicted RBP12.45□□□□□ -0.42
SPARC-207ENST00000537849 NAA35Q5VZE5 725 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 PHF13Q86YI8 300 aaPredicted RBP12.45□□□□□ -0.42
SPARC-207ENST00000537849 PASD1Q8IV76 773 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 MCOLN2Q8IZK6 566 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 TXLNBQ8N3L3 684 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 RNF10Q8N5U6 811 aaKnown RBP12.45□□□□□ -0.42
SPARC-207ENST00000537849 HASPINQ8TF76 798 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 ARHGEF26Q96DR7 871 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 HTATIP2Q9BUP3 242 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 TSGA10Q9BZW7 698 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 ZNF518BQ9C0D4 1074 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 PDCL3Q9H2J4 239 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 MARCH5Q9NX47 278 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 CYTH4Q9UIA0 394 aa12.45□□□□□ -0.42
SPARC-207ENST00000537849 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.45□□□□□ -0.42
SPARC-207ENST00000537849 PRG3Q9Y2Y8 225 aaPredicted RBP12.45□□□□□ -0.42
SPARC-207ENST00000537849 A0A0A6YYK5 440 aaPredicted RBP12.44□□□□□ -0.42
SPARC-207ENST00000537849 FAM170AA1A519 330 aa12.44□□□□□ -0.42
SPARC-207ENST00000537849 LSM8O95777 96 aaKnown RBP12.44□□□□□ -0.42
SPARC-207ENST00000537849 TUBB4AP04350 444 aa12.44□□□□□ -0.42
SPARC-207ENST00000537849 CYP1A2P05177 515 aa12.44□□□□□ -0.42
SPARC-207ENST00000537849 ODC1P11926 461 aa12.44□□□□□ -0.42
SPARC-207ENST00000537849 TNNT1P13805 278 aa12.44□□□□□ -0.42
SPARC-207ENST00000537849 SYN1P17600 705 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms