RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 FBXL21Q9UKT6 434 aa15.89■□□□□ 0.13
USP28-204ENST00000537642 R3HCC1Q9Y3T6 440 aaKnown RBP15.89■□□□□ 0.13
USP28-204ENST00000537642 GOLGA6L4A6NEF3 574 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 GJA1P17302 382 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 NPR3P17342 541 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 ATF6P18850 670 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 AVPR2P30518 371 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 TUFMP49411 452 aaKnown RBP15.88■□□□□ 0.13
USP28-204ENST00000537642 TSPY1Q01534 308 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 SNW1Q13573 536 aaKnown RBP15.88■□□□□ 0.13
USP28-204ENST00000537642 MGAT5BQ3V5L5 792 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 DPH6Q7L8W6 267 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 DNAJB7Q7Z6W7 309 aaPredicted RBP15.88■□□□□ 0.13
USP28-204ENST00000537642 SIX5Q8N196 739 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 ENGASEQ8NFI3 743 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 SHKBP1Q8TBC3 707 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 SPPL2BQ8TCT7 592 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 GPR152Q8TDT2 470 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 PARD3BQ8TEW8 1205 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 PSMG2Q969U7 264 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 ZSWIM3Q96MP5 696 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 PKMYT1Q99640 499 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 SEPT5Q99719 369 aaPredicted RBP15.88■□□□□ 0.13
USP28-204ENST00000537642 LPIN3Q9BQK8 851 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 ZNF334Q9HCZ1 680 aaPredicted RBP15.88■□□□□ 0.13
USP28-204ENST00000537642 SLC2A4RGQ9NR83 387 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 ABI2Q9NYB9 513 aaPredicted RBP15.88■□□□□ 0.13
USP28-204ENST00000537642 WNT16Q9UBV4 365 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 MAPK8IP1Q9UQF2 711 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 TRAF3IP3Q9Y228 551 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 ASB3Q9Y575 518 aa15.88■□□□□ 0.13
USP28-204ENST00000537642 KRBA1A5PL33 1030 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 LRRIQ3A6PVS8 624 aaPredicted RBP15.87■□□□□ 0.13
USP28-204ENST00000537642 KIF20AO95235 890 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 HAPLN1P10915 354 aaPredicted RBP15.87■□□□□ 0.13
USP28-204ENST00000537642 FCARP24071 287 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 LHX1P48742 406 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 GPC5P78333 572 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 CLDN10P78369 228 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 MYL7Q01449 175 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 PNOCQ13519 176 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 TEAD2Q15562 447 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 CCDC142Q17RM4 750 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 INTS6LQ5JSJ4 861 aaKnown RBP15.87■□□□□ 0.13
USP28-204ENST00000537642 FAM78AQ5JUQ0 283 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 CWF19L1Q69YN2 538 aaKnown RBP15.87■□□□□ 0.13
USP28-204ENST00000537642 TANGO2Q6ICL3 276 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 KBTBD7Q8WVZ9 684 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 PLA2G2FQ9BZM2 168 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 KCNH6Q9H252 994 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 MFSD1Q9H3U5 465 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 CA14Q9ULX7 337 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 PCDHB5Q9Y5E4 795 aa15.87■□□□□ 0.13
USP28-204ENST00000537642 A0A1W2PRU2 124 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 CALUO43852 315 aaPredicted RBP15.86■□□□□ 0.13
USP28-204ENST00000537642 ECI2O75521 394 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 LMO2P25791 158 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 MYL6P60660 151 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 FAM160A1Q05DH4 1040 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 NFE2Q16621 373 aaPredicted RBP15.86■□□□□ 0.13
USP28-204ENST00000537642 NFIL3Q16649 462 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 TDRD10Q5VZ19 366 aaKnown RBP15.86■□□□□ 0.13
USP28-204ENST00000537642 ASTLQ6HA08 431 aaPredicted RBP15.86■□□□□ 0.13
USP28-204ENST00000537642 GAREM2Q75VX8 874 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 ITIH5Q86UX2 942 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 GUF1Q8N442 669 aaKnown RBP15.86■□□□□ 0.13
USP28-204ENST00000537642 TMEM105Q8N8V8 129 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 PRSS33Q8NF86 280 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 FLCNQ8NFG4 579 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 CCDC34Q96HJ3 373 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 ASB16Q96NS5 453 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 PI4K2AQ9BTU6 479 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 XYLT2Q9H1B5 865 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 GTF3C4Q9UKN8 822 aa15.86■□□□□ 0.13
USP28-204ENST00000537642 MYBPHLA2RUH7 354 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 ATP2C2O75185 946 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 STAU1O95793 577 aaKnown RBP15.85■□□□□ 0.13
USP28-204ENST00000537642 C4BPAP04003 597 aaKnown RBP15.85■□□□□ 0.13
USP28-204ENST00000537642 WARSP23381 471 aaKnown RBP15.85■□□□□ 0.13
USP28-204ENST00000537642 PCSK1P29120 753 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 PLA2G5P39877 138 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 GPR15P49685 360 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 CLCN5P51795 746 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 DLG4P78352 724 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 TRPC3Q13507 836 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 CEP135Q66GS9 1140 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 FAM171BQ6P995 826 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 SMYD4Q8IYR2 804 aaPredicted RBP15.85■□□□□ 0.13
USP28-204ENST00000537642 FAM200AQ8TCP9 573 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 GIPC2Q8TF65 315 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 ELSPBP1Q96BH3 223 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 MMS19Q96T76 1030 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 MRPL45Q9BRJ2 306 aaKnown RBP15.85■□□□□ 0.13
USP28-204ENST00000537642 CIZ1Q9ULV3 898 aaPredicted RBP15.85■□□□□ 0.13
USP28-204ENST00000537642 NME7Q9Y5B8 376 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 DENND4CQ5VZ89 1909 aa15.85■□□□□ 0.13
USP28-204ENST00000537642 PTPRDP23468 1912 aa15.84■□□□□ 0.13
USP28-204ENST00000537642 PHACTR2O75167 634 aa15.84■□□□□ 0.13
USP28-204ENST00000537642 NR2F2P24468 414 aa15.84■□□□□ 0.13
USP28-204ENST00000537642 CYP2F1P24903 491 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms