RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ZFYVE27Q5T4F4 411 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 DHDDSQ86SQ9 333 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 CLIP3Q96DZ5 547 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 TYW1Q9NV66 732 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 TMA7Q9Y2S6 64 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 FUOMA2VDF0 154 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 YDJCA8MPS7 323 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 S100BP04271 92 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 ATP6V1B1P15313 513 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 CREB1P16220 341 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 RPL21P46778 160 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 RCAN1P53805 252 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 LRRC63Q05C16 580 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 NSUN2Q08J23 767 aaKnown RBP eCLIP11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 GRAMD1BQ3KR37 738 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 CMTR1Q8N1G2 835 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 UBL4BQ8N7F7 174 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 FANCBQ8NB91 859 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 RSL24D1Q9UHA3 163 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 ZNHIT2Q9UHR6 403 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 DCTN4Q9UJW0 460 aa11.42□□□□□ -0.58
CLSTN3-207ENST00000537408 A0A0G2JND7 137 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 GH2P01242 217 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 ANXA13P27216 316 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 HMOX2P30519 316 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 GRIA2P42262 883 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 RAP1GDS1P52306 607 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 TUBA1BP68363 451 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 POU5F1Q01860 360 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 BTKQ06187 659 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 EXOC3L4Q17RC7 722 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 LRRC36Q1X8D7 754 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 METTL21CQ5VZV1 264 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 TMEM214Q6NUQ4 689 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 RGS9BPQ6ZS82 235 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 PIK3AP1Q6ZUJ8 805 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 TUBA1AQ71U36 451 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 SH3RF3Q8TEJ3 882 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 BTBD9Q96Q07 612 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 PLIN2Q99541 437 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 MTO1Q9Y2Z2 717 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 MYH1P12882 1939 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 A0A0A6YYK5 440 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 PIM1P11309 404 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 PCP11498 1178 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 RIPOR1Q6ZS17 1223 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 TMPRSS6Q8IU80 811 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 LSM14AQ8ND56 463 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 PNMA1Q8ND90 353 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 GSDMBQ8TAX9 411 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 BORCS5Q969J3 196 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 UIMC1Q96RL1 719 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 ARL8BQ9NVJ2 186 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 LZTS1Q9Y250 596 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 SYNGAP1Q96PV0 1343 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 BAIAP3O94812 1187 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 KRT75O95678 551 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 AMPD1P23109 780 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 ZNF280AP59817 542 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 PUS10Q3MIT2 529 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 ZNF362Q5T0B9 420 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 TMEM63BQ5T3F8 832 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 LRRC49Q8IUZ0 686 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 CCDC138Q96M89 665 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 PPP1R10Q96QC0 940 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 PHF20Q9BVI0 1012 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 NUF2Q9BZD4 464 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 TRNAU1APQ9NX07 287 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 HEY2Q9UBP5 337 aa11.41□□□□□ -0.58
CLSTN3-207ENST00000537408 CXCL11O14625 94 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 XPOTO43592 962 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 KLRC4O43908 158 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 STAMBPO95630 424 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 KRT15P19012 456 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 COPB2P35606 906 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 STAT4Q14765 748 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 PDK4Q16654 411 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 SCFD1Q8WVM8 642 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 BIRC8Q96P09 236 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 GPATCH1Q9BRR8 931 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 GBA3Q9H227 469 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 SEPT11Q9NVA2 429 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 B2RBV5 119 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 GGPS1O95749 300 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 MYCLP1P12525 358 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 RXRGP48443 463 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 TMCO4Q5TGY1 634 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 ADGRG6Q86SQ4 1221 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 NT5DC3Q86UY8 548 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 SRBD1Q8N5C6 995 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 ALLCQ8N6M5 410 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 TRIML2Q8N7C3 387 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 NSUN4Q96CB9 384 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 GRHL1Q9NZI5 618 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 SENP1Q9P0U3 644 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 TRIM64CA6NLI5 447 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 COL6A2P12110 1019 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 KRT4P19013 534 aa11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 ENDOUP21128 410 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-207ENST00000537408 HOXA7P31268 230 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms