RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 POTECB2RU33 542 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 SH3BP5O60239 455 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 DGKIO75912 1065 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 KRT34O76011 436 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 ITGA4P13612 1032 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 GCLMP48507 274 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 HDAC4P56524 1084 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 GPSM2P81274 684 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 MPP3Q13368 585 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 RHPN2Q8IUC4 686 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 POMGNT1Q8WZA1 660 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 ART4Q93070 314 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 TMEM120AQ9BXJ8 343 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 ADNPQ9H2P0 1102 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 MRPL47Q9HD33 250 aaKnown RBP5.65□□□□□ -1.5
PTPRD-213ENST00000537002 MRPL40Q9NQ50 206 aaKnown RBP5.65□□□□□ -1.5
PTPRD-213ENST00000537002 ZDHHC18Q9NUE0 388 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 AURKCQ9UQB9 309 aa5.65□□□□□ -1.5
PTPRD-213ENST00000537002 SIGLEC1Q9BZZ2 1709 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 NEMP1O14524 444 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 CYP2D6P10635 497 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 ACAT1P24752 427 aaKnown RBP5.65□□□□□ -1.51
PTPRD-213ENST00000537002 MTM1Q13496 603 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 SLC12A1Q13621 1099 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 XKR9Q5GH70 373 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 IYDQ6PHW0 289 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 ADCK1Q86TW2 530 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 EXOC3L1Q86VI1 746 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 TTC8Q8TAM2 541 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 ACCSQ96QU6 501 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 AGPAT1Q99943 283 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 DUSP9Q99956 384 aaKnown RBP5.65□□□□□ -1.51
PTPRD-213ENST00000537002 VPS45Q9NRW7 570 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 UVRAGQ9P2Y5 699 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 HBS1LQ9Y450 684 aaKnown RBP5.65□□□□□ -1.51
PTPRD-213ENST00000537002 ORC6Q9Y5N6 252 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 PEAK1Q9H792 1746 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 ATP2B4P23634 1241 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 KRT39Q6A163 491 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 USP17L2Q6R6M4 530 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 SCUBE1Q8IWY4 988 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 PLEKHO2Q8TD55 490 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 GDPD5Q8WTR4 605 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 CNGB3Q9NQW8 809 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 PCMTD2Q9NV79 361 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 FAIMQ9NVQ4 179 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 AK5Q9Y6K8 562 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 DDX60Q8IY21 1712 aaKnown RBP5.65□□□□□ -1.51
PTPRD-213ENST00000537002 COL22A1Q8NFW1 1626 aaPredicted RBP5.65□□□□□ -1.51
PTPRD-213ENST00000537002 SYCE1LA8MT33 242 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 SLC9A1P19634 815 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 COILP38432 576 aaPredicted RBP5.65□□□□□ -1.51
PTPRD-213ENST00000537002 MAGEA4P43358 317 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 CHN2P52757 468 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 BPIFB4P59827 614 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 DAB2P98082 770 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 GIT2Q14161 759 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 PARP10Q53GL7 1025 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 ZFP1Q6P2D0 407 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 GJB7Q6PEY0 223 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 HEATR4Q86WZ0 1026 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 MCF2L2Q86YR7 1114 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 CYGBQ8WWM9 190 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 ATP6V0A1Q93050 837 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 KLHL4Q9C0H6 718 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 TIAM2Q8IVF5 1701 aa5.65□□□□□ -1.51
PTPRD-213ENST00000537002 SPATA31A1Q5TZJ5 1347 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 PRR36Q9H6K5 1346 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 ARHGEF9O43307 516 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 EDF1O60869 148 aaKnown RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 ENTPD5O75356 428 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 UFL1O94874 794 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 PHKG2P15735 406 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 SCNN1BP51168 640 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 DLG4P78352 724 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 CENPCQ03188 943 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 TEDDM1Q5T9Z0 273 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 ZBTB38Q8NAP3 1195 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 ECSITQ9BQ95 431 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 DENND2DQ9H6A0 471 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 TLK1Q9UKI8 766 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 POTEB3A0JP26 581 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 MEI4A8MW99 385 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 KLRC4O43908 158 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 HSPA8P11142 646 aaKnown RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 OXCT1P55809 520 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 USP46P62068 366 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 RRP1BQ14684 758 aaKnown RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 THOC7Q6I9Y2 204 aaKnown RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 POTEBQ6S5H4 581 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 GPR141Q7Z602 305 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 FBXO25Q8TCJ0 367 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 TMA16Q96EY4 203 aaKnown RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 DCUN1D5Q9BTE7 237 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 SNX25Q9H3E2 840 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 SEMA4AQ9H3S1 761 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 ATAD3AQ9NVI7 634 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 R3HDM2Q9Y2K5 976 aaKnown RBP5.64□□□□□ -1.51
PTPRD-213ENST00000537002 SUGT1Q9Y2Z0 365 aa5.64□□□□□ -1.51
PTPRD-213ENST00000537002 NEU2Q9Y3R4 380 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms