RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 OGTO15294 1046 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 ZSCAN5DPP0CG00 497 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 PECAM1P16284 738 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 BRD2P25440 801 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 NF2P35240 595 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 ALDH5A1P51649 535 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 GSCP56915 257 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 OGDHQ02218 1023 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 TRPC3Q13507 836 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 WDR72Q3MJ13 1102 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 ACO2Q99798 780 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 MTMR12Q9C0I1 747 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 RXFP1Q9HBX9 757 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 SENP1Q9P0U3 644 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 KLHL14Q9P2G3 628 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 STRIP2Q9ULQ0 834 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 FZD1Q9UP38 647 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 GJA3Q9Y6H8 435 aa16.91■□□□□ 0.3
CHMP1A-202ENST00000535997 MAGEB2O15479 319 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 TAC1P20366 129 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 GCAP28676 217 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 ZNF268Q14587 947 aaPredicted RBP16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 RASA2Q15283 850 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 PREPLQ4J6C6 727 aaPredicted RBP16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 ZNF394Q53GI3 561 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 ZBTB33Q86T24 672 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 TBC1D1Q86TI0 1168 aaPredicted RBP16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 RPAINQ86UA6 219 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 SEPT1Q8WYJ6 367 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 PITPNM3Q9BZ71 974 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 PCDH9Q9HC56 1237 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 AGAP1Q9UPQ3 857 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 SHOC2Q9UQ13 582 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 LRRD1A4D1F6 860 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 PRPF4O43172 522 aaKnown RBP eCLIP16.9■□□□□ 0.35e-7■■■■□ 24.1
CHMP1A-202ENST00000535997 POLR2BP30876 1174 aaKnown RBP16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 PLCB3Q01970 1234 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 ACVR2BQ13705 512 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 MXD4Q14582 209 aaPredicted RBP16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 TMED2Q15363 201 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 RNASEH2BQ5TBB1 312 aaKnown RBP16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 ANGEL2Q5VTE6 544 aaKnown RBP16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 RNF43Q68DV7 783 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 CENPUQ71F23 418 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 PCGF5Q86SE9 256 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 CPSF3Q9UKF6 684 aaKnown RBP16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 LCTP09848 1927 aa16.9■□□□□ 0.3
CHMP1A-202ENST00000535997 ATP6V1G2O95670 118 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 ASMTLO95671 621 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 ETS1P14921 441 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 EDNRBP24530 442 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 WDR4P57081 412 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 MAPK6Q16659 721 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 SH3D19Q5HYK7 790 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 NOL9Q5SY16 702 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 CDCA2Q69YH5 1023 aaPredicted RBP16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 TXNRD3NBQ6F5E7 133 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 EXOC8Q8IYI6 725 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 FITM2Q8N6M3 262 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 SLC35B2Q8TB61 432 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 DENND1AQ8TEH3 1009 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 TCP11Q8WWU5 503 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 FAM167AQ96KS9 214 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 FRMD8P1Q9BZ68 369 aaPredicted RBP16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 SIGLEC16A6NMB1 481 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 FZD9O00144 591 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 GAS2O43903 313 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 WEE2P0C1S8 567 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 FOXN2P32314 431 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 TCF7P36402 384 aaPredicted RBP16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 NCALDP61601 193 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 ADCY1Q08828 1119 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 TFAP2BQ92481 460 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 LHX5Q9H2C1 402 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 ECT2Q9H8V3 914 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 SLC24A2Q9UI40 661 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 GGT7Q9UJ14 662 aa16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 SMG5Q9UPR3 1016 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-202ENST00000535997 SGK1O00141 431 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 KRT7P08729 469 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 SRGAP2CP0DJJ0 459 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 NQO1P15559 274 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 YWHAEP62258 255 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 CCDC15Q0P6D6 951 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 LAMTOR4Q0VGL1 99 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 METTL7BQ6UX53 244 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 LBX2Q6XYB7 198 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 RGS9BPQ6ZS82 235 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 PNMA8AQ86V59 439 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 CEP57Q86XR8 500 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 ZBTB8OSQ8IWT0 167 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 ZBED8Q8IZ13 594 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 TTC13Q8NBP0 860 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 FNIP1Q8TF40 1166 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 TMEM121Q9BTD3 319 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 PHACTR1Q9C0D0 580 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 TRABDQ9H4I3 376 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 NOD2Q9HC29 1040 aa16.88■□□□□ 0.29
CHMP1A-202ENST00000535997 A0A1B0GUA9 196 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms