RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 STX10O60499 249 aa23.79■■□□□ 1.4
VPS37C-202ENST00000535818 PTPN2P17706 415 aa23.79■■□□□ 1.4
VPS37C-202ENST00000535818 WARSP23381 471 aaKnown RBP23.79■■□□□ 1.4
VPS37C-202ENST00000535818 ALDH1A3P47895 512 aa23.79■■□□□ 1.4
VPS37C-202ENST00000535818 MGAT5BQ3V5L5 792 aa23.79■■□□□ 1.4
VPS37C-202ENST00000535818 DCAF17Q5H9S7 520 aaPredicted RBP23.79■■□□□ 1.4
VPS37C-202ENST00000535818 INTS6LQ5JSJ4 861 aaKnown RBP23.79■■□□□ 1.4
VPS37C-202ENST00000535818 TCERG1LQ5VWI1 586 aa23.79■■□□□ 1.4
VPS37C-202ENST00000535818 IQCEQ6IPM2 695 aa23.79■■□□□ 1.4
VPS37C-202ENST00000535818 SPPL2BQ8TCT7 592 aa23.79■■□□□ 1.4
VPS37C-202ENST00000535818 KBTBD7Q8WVZ9 684 aa23.79■■□□□ 1.4
VPS37C-202ENST00000535818 ZNF512Q96ME7 567 aaPredicted RBP23.79■■□□□ 1.4
VPS37C-202ENST00000535818 SEPT5Q99719 369 aaPredicted RBP23.79■■□□□ 1.4
VPS37C-202ENST00000535818 IMPG2Q9BZV3 1241 aa23.79■■□□□ 1.4
VPS37C-202ENST00000535818 CRISPLD1Q9H336 500 aa23.79■■□□□ 1.4
VPS37C-202ENST00000535818 SNX25Q9H3E2 840 aa23.79■■□□□ 1.4
VPS37C-202ENST00000535818 ABI2Q9NYB9 513 aaPredicted RBP23.79■■□□□ 1.4
VPS37C-202ENST00000535818 DNMT3BQ9UBC3 853 aaKnown RBP23.79■■□□□ 1.4
VPS37C-202ENST00000535818 GABRDO14764 452 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 HLA-DRAP01903 254 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 P4HA1P13674 534 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 EPHB3P54753 998 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 STX17P56962 302 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 PPP3CAQ08209 521 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 NFE2Q16621 373 aaPredicted RBP23.78■■□□□ 1.4
VPS37C-202ENST00000535818 SGSM1Q2NKQ1 1148 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 SCARA5Q6ZMJ2 495 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 LIMS2Q7Z4I7 341 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 LRRTM3Q86VH5 581 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 ZDHHC14Q8IZN3 488 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 TTC9BQ8N6N2 239 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 OR6B3Q8NGW1 331 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 KHSRPQ92945 711 aaKnown RBP eCLIP23.78■■□□□ 1.43e-9■■■□□ 16.3
VPS37C-202ENST00000535818 CEP63Q96MT8 703 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 CORO1BQ9BR76 489 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 VRTNQ9H8Y1 702 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 TMEM8AQ9HCN3 771 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.78■■□□□ 1.4
VPS37C-202ENST00000535818 HSFX1Q9UBD0 423 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 MUTYHQ9UIF7 546 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 PCDHB5Q9Y5E4 795 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 C5orf42Q9H799 3197 aa23.78■■□□□ 1.4
VPS37C-202ENST00000535818 DCXO43602 365 aa23.77■■□□□ 1.4
VPS37C-202ENST00000535818 HCRTO43612 131 aa23.77■■□□□ 1.4
VPS37C-202ENST00000535818 TACC1O75410 805 aa23.77■■□□□ 1.4
VPS37C-202ENST00000535818 RHOP08100 348 aa23.77■■□□□ 1.4
VPS37C-202ENST00000535818 ALADP13716 330 aa23.77■■□□□ 1.4
VPS37C-202ENST00000535818 GTF2H1P32780 548 aa23.77■■□□□ 1.4
VPS37C-202ENST00000535818 TUFMP49411 452 aaKnown RBP23.77■■□□□ 1.4
VPS37C-202ENST00000535818 CCDC40Q4G0X9 1142 aa23.77■■□□□ 1.4
VPS37C-202ENST00000535818 KRT39Q6A163 491 aa23.77■■□□□ 1.4
VPS37C-202ENST00000535818 TTI2Q6NXR4 508 aa23.77■■□□□ 1.4
VPS37C-202ENST00000535818 CCDC150Q8NCX0 1101 aa23.77■■□□□ 1.4
VPS37C-202ENST00000535818 MYADMQ96S97 322 aa23.77■■□□□ 1.4
VPS37C-202ENST00000535818 SYT15Q9BQS2 421 aa23.77■■□□□ 1.4
VPS37C-202ENST00000535818 MRPL45Q9BRJ2 306 aaKnown RBP23.77■■□□□ 1.4
VPS37C-202ENST00000535818 ARMCX3Q9UH62 379 aaPredicted RBP23.77■■□□□ 1.4
VPS37C-202ENST00000535818 CDH9Q9ULB4 789 aa23.77■■□□□ 1.4
VPS37C-202ENST00000535818 PDGFRBP09619 1106 aa23.76■■□□□ 1.39
VPS37C-202ENST00000535818 GNL1P36915 607 aaPredicted RBP23.76■■□□□ 1.39
VPS37C-202ENST00000535818 MXI1P50539 228 aa23.76■■□□□ 1.39
VPS37C-202ENST00000535818 FAM200AQ8TCP9 573 aa23.76■■□□□ 1.39
VPS37C-202ENST00000535818 TAF4BQ92750 862 aa23.76■■□□□ 1.39
VPS37C-202ENST00000535818 ELMO3Q96BJ8 720 aa23.76■■□□□ 1.39
VPS37C-202ENST00000535818 DUSP9Q99956 384 aaKnown RBP23.76■■□□□ 1.39
VPS37C-202ENST00000535818 METTL14Q9HCE5 456 aaKnown RBP23.76■■□□□ 1.39
VPS37C-202ENST00000535818 TMLHEQ9NVH6 421 aa23.76■■□□□ 1.39
VPS37C-202ENST00000535818 CEP72Q9P209 647 aa23.76■■□□□ 1.39
VPS37C-202ENST00000535818 LIMD1Q9UGP4 676 aa23.76■■□□□ 1.39
VPS37C-202ENST00000535818 GTF3C4Q9UKN8 822 aa23.76■■□□□ 1.39
VPS37C-202ENST00000535818 MRPS23Q9Y3D9 190 aaKnown RBP23.76■■□□□ 1.39
VPS37C-202ENST00000535818 NCOR1O75376 2440 aa23.76■■□□□ 1.39
VPS37C-202ENST00000535818 N4BP1O75113 896 aaKnown RBP23.75■■□□□ 1.39
VPS37C-202ENST00000535818 SOAT2O75908 522 aa23.75■■□□□ 1.39
VPS37C-202ENST00000535818 MBD3O95983 291 aa23.75■■□□□ 1.39
VPS37C-202ENST00000535818 FAM163BP0C2L3 166 aa23.75■■□□□ 1.39
VPS37C-202ENST00000535818 LMO2P25791 158 aa23.75■■□□□ 1.39
VPS37C-202ENST00000535818 PSMC1P62191 440 aaKnown RBP23.75■■□□□ 1.39
VPS37C-202ENST00000535818 VEPH1Q14D04 833 aa23.75■■□□□ 1.39
VPS37C-202ENST00000535818 FOXR2Q6PJQ5 311 aa23.75■■□□□ 1.39
VPS37C-202ENST00000535818 PDZD4Q76G19 769 aaPredicted RBP23.75■■□□□ 1.39
VPS37C-202ENST00000535818 FILIP1Q7Z7B0 1213 aa23.75■■□□□ 1.39
VPS37C-202ENST00000535818 TAS1R2Q8TE23 839 aa23.75■■□□□ 1.39
VPS37C-202ENST00000535818 PI4K2AQ9BTU6 479 aa23.75■■□□□ 1.39
VPS37C-202ENST00000535818 SMYD3Q9H7B4 428 aa23.75■■□□□ 1.39
VPS37C-202ENST00000535818 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.75■■□□□ 1.392e-6■■■■■ 122.6
VPS37C-202ENST00000535818 ASAH2Q9NR71 780 aa23.75■■□□□ 1.39
VPS37C-202ENST00000535818 CUL9Q8IWT3 2517 aa23.74■■□□□ 1.39
VPS37C-202ENST00000535818 A8MXQ7 604 aa23.74■■□□□ 1.39
VPS37C-202ENST00000535818 PI4K2BG5E9Z4 385 aa23.74■■□□□ 1.39
VPS37C-202ENST00000535818 ASS1P00966 412 aaKnown RBP23.74■■□□□ 1.39
VPS37C-202ENST00000535818 HAPLN1P10915 354 aaPredicted RBP23.74■■□□□ 1.39
VPS37C-202ENST00000535818 RAP1GAPP47736 663 aa23.74■■□□□ 1.39
VPS37C-202ENST00000535818 MAPRE1Q15691 268 aaKnown RBP23.74■■□□□ 1.39
VPS37C-202ENST00000535818 CYP4A22Q5TCH4 519 aa23.74■■□□□ 1.39
VPS37C-202ENST00000535818 SPOPLQ6IQ16 392 aa23.74■■□□□ 1.39
VPS37C-202ENST00000535818 SPATA2LQ8IUW3 424 aaPredicted RBP23.74■■□□□ 1.39
VPS37C-202ENST00000535818 ITFG1Q8TB96 612 aa23.74■■□□□ 1.39
VPS37C-202ENST00000535818 GPT2Q8TD30 523 aa23.74■■□□□ 1.39
VPS37C-202ENST00000535818 ING5Q8WYH8 240 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms