RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 AFMIDQ63HM1 303 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 B3GNT9Q6UX72 402 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 ARHGEF25Q86VW2 580 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 SDR16C5Q8N3Y7 309 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 IFI44Q8TCB0 444 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 SMCR8Q8TEV9 937 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-202ENST00000535689 NUP133Q8WUM0 1156 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 ATXN2LQ8WWM7 1075 aaKnown RBP4.01□□□□□ -1.77
SNHG1-202ENST00000535689 SLC35A4Q96G79 324 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 ZC3H10Q96K80 434 aaKnown RBP4.01□□□□□ -1.77
SNHG1-202ENST00000535689 ACO2Q99798 780 aaKnown RBP4.01□□□□□ -1.77
SNHG1-202ENST00000535689 XYLT2Q9H1B5 865 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 JKAMPQ9P055 326 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 PPP4R1LQ9P1A2 415 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 ABCF2Q9UG63 623 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 CCNL1Q9UK58 526 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-202ENST00000535689 ATP11BQ9Y2G3 1177 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.01□□□□□ -1.772e-26■□□□□ 8.9
SNHG1-202ENST00000535689 NR2E3Q9Y5X4 410 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 USP47Q96K76 1375 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 IGSF1Q8N6C5 1336 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 TTC21AQ8NDW8 1320 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 LRRC37A3O60309 1634 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 TRPM1Q7Z4N2 1603 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 CCDC194A0A1B0GVG4 234 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 CXorf49A8MYA2 514 aaPredicted RBP4□□□□□ -1.77
SNHG1-202ENST00000535689 KIAA0391O15091 583 aaKnown RBP4□□□□□ -1.77
SNHG1-202ENST00000535689 TRIM24O15164 1050 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 TBC1D4O60343 1298 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 CYP2C9P11712 490 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 SYN1P17600 705 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 EDNRBP24530 442 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 CTCFP49711 727 aaPredicted RBP4□□□□□ -1.77
SNHG1-202ENST00000535689 RGS19P49795 217 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 SELENOPP49908 381 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 MAP2K6P52564 334 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 CTSWP56202 376 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 ADAM8P78325 824 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 POU6F2P78424 691 aaPredicted RBP4□□□□□ -1.77
SNHG1-202ENST00000535689 DSC2Q02487 901 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 ZNF844Q08AG5 666 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 KIAA0753Q2KHM9 967 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 LONRF3Q496Y0 759 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 FLYWCH1Q4VC44 716 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 KHDC1LQ5JSQ8 128 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 RNF220Q5VTB9 566 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 NAIF1Q69YI7 327 aaPredicted RBP4□□□□□ -1.77
SNHG1-202ENST00000535689 TCTN3Q6NUS6 607 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 KSR2Q6VAB6 950 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 PTF1AQ7RTS3 328 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 COL23A1Q86Y22 540 aaPredicted RBP4□□□□□ -1.77
SNHG1-202ENST00000535689 RAVER1Q8IY67 606 aaKnown RBP4□□□□□ -1.77
SNHG1-202ENST00000535689 PJA1Q8NG27 643 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 OR6B3Q8NGW1 331 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 TMEM176AQ96HP8 235 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 LOXL4Q96JB6 756 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 PNKPQ96T60 521 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 SELENOOQ9BVL4 669 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 EIF2AQ9BY44 585 aaKnown RBP4□□□□□ -1.77
SNHG1-202ENST00000535689 BTBD1Q9H0C5 482 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 ZCWPW1Q9H0M4 648 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 RNPEPQ9H4A4 650 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 KIAA1586Q9HCI6 787 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 SERHLQ9NQF3 203 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 PARPBPQ9NWS1 579 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 RNF181Q9P0P0 153 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 USP25Q9UHP3 1055 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 SERPINB13Q9UIV8 391 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 L1RE1Q9UN81 338 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 PCDHB1Q9Y5F3 818 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 PCDHA3Q9Y5H8 950 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 SPATA31E1Q6ZUB1 1445 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 PIK3C2AO00443 1686 aa4□□□□□ -1.77
SNHG1-202ENST00000535689 CGNL1Q0VF96 1302 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 GAGE12BA1L429 117 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 CFAP69A5D8W1 941 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 GAGE12HA6NDE8 117 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 PATE3B3GLJ2 98 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 SLC43A1O75387 559 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 INMTO95050 263 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 PEX11BO96011 259 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 CD1AP06126 327 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 IFIT2P09913 472 aaKnown RBP3.99□□□□□ -1.77
SNHG1-202ENST00000535689 CKBP12277 381 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 SLC6A9P48067 706 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 RAB1AP62820 205 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 NKX6-1P78426 367 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-202ENST00000535689 ATP8B2P98198 1209 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 RAB32Q13637 225 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 ZNF267Q14586 743 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-202ENST00000535689 COBLL1Q53SF7 1204 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 EMC10Q5UCC4 262 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 ZNF529Q6P280 563 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 NPNTQ6UXI9 565 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 ZNF783Q6ZMS7 281 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 DPP9Q86TI2 863 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 GPR135Q8IZ08 494 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 KIAA0319LQ8IZA0 1049 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 FUKQ8N0W3 1084 aa3.99□□□□□ -1.77
SNHG1-202ENST00000535689 SAMD3Q8N6K7 520 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms