RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 UBXN7O94888 489 aa6.44□□□□□ -1.38
PRKDC-205ENST00000535375 CHRM2P08172 466 aa6.44□□□□□ -1.38
PRKDC-205ENST00000535375 PIM1P11309 404 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-205ENST00000535375 NXPH1P58417 271 aa6.44□□□□□ -1.38
PRKDC-205ENST00000535375 RAB1AP62820 205 aa6.44□□□□□ -1.38
PRKDC-205ENST00000535375 SIM1P81133 766 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-205ENST00000535375 PTPRRQ15256 657 aa6.44□□□□□ -1.38
PRKDC-205ENST00000535375 MINDY4Q4G0A6 757 aa6.44□□□□□ -1.38
PRKDC-205ENST00000535375 EPM2AIP1Q7L775 607 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-205ENST00000535375 TMPRSS9Q7Z410 1059 aa6.44□□□□□ -1.38
PRKDC-205ENST00000535375 SIMC1Q8NDZ2 872 aa6.44□□□□□ -1.38
PRKDC-205ENST00000535375 MYCBPAPQ8TBZ2 947 aa6.44□□□□□ -1.38
PRKDC-205ENST00000535375 TFAP2BQ92481 460 aa6.44□□□□□ -1.38
PRKDC-205ENST00000535375 TAAR9Q96RI9 348 aa6.44□□□□□ -1.38
PRKDC-205ENST00000535375 ANLNQ9NQW6 1124 aa6.44□□□□□ -1.38
PRKDC-205ENST00000535375 G3BP2Q9UN86 482 aaKnown RBP6.44□□□□□ -1.38
PRKDC-205ENST00000535375 A0A088AWK7 358 aa6.43□□□□□ -1.38
PRKDC-205ENST00000535375 MYO1CO00159 1063 aa6.43□□□□□ -1.38
PRKDC-205ENST00000535375 UNC5CO95185 931 aa6.43□□□□□ -1.38
PRKDC-205ENST00000535375 CD6P30203 668 aa6.43□□□□□ -1.38
PRKDC-205ENST00000535375 GCLCP48506 637 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-205ENST00000535375 TCF15Q12870 199 aa6.43□□□□□ -1.38
PRKDC-205ENST00000535375 NFE2Q16621 373 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-205ENST00000535375 LONRF3Q496Y0 759 aa6.43□□□□□ -1.38
PRKDC-205ENST00000535375 RBM20Q5T481 1227 aaKnown RBP6.43□□□□□ -1.38
PRKDC-205ENST00000535375 PPP1R32Q7Z5V6 425 aa6.43□□□□□ -1.38
PRKDC-205ENST00000535375 PLBD2Q8NHP8 589 aa6.43□□□□□ -1.38
PRKDC-205ENST00000535375 PPP1R35Q8TAP8 253 aa6.43□□□□□ -1.38
PRKDC-205ENST00000535375 MOGAT1Q96PD6 335 aa6.43□□□□□ -1.38
PRKDC-205ENST00000535375 OSBPL9Q96SU4 736 aa6.43□□□□□ -1.38
PRKDC-205ENST00000535375 PIH1D1Q9NWS0 290 aaKnown RBP6.43□□□□□ -1.38
PRKDC-205ENST00000535375 FOXJ2Q9P0K8 574 aa6.43□□□□□ -1.38
PRKDC-205ENST00000535375 STAP2Q9UGK3 403 aa6.43□□□□□ -1.38
PRKDC-205ENST00000535375 PLEKHM1Q9Y4G2 1056 aa6.43□□□□□ -1.38
PRKDC-205ENST00000535375 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.43□□□□□ -1.38
PRKDC-205ENST00000535375 A0A1W2PPL8 197 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 SCGB1D2O95969 90 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 GRPP07492 148 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 SATB1Q01826 763 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 IQCB1Q15051 598 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 LRRC41Q15345 812 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 AKNAD1Q5T1N1 836 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 FAM102BQ5T8I3 360 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 B3GNT9Q6UX72 402 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 ADGRG3Q86Y34 549 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 ZBTB34Q8NCN2 500 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 PDLIM2Q96JY6 352 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 SLC46A1Q96NT5 459 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 NELL2Q99435 816 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 ACTRT3Q9BYD9 372 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 TTYH3Q9C0H2 523 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 SLC17A6Q9P2U8 582 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 GABBR1Q9UBS5 961 aa6.42□□□□□ -1.38
PRKDC-205ENST00000535375 MYBP10242 640 aa6.41□□□□□ -1.38
PRKDC-205ENST00000535375 GRIA3P42263 894 aa6.41□□□□□ -1.38
PRKDC-205ENST00000535375 HNRNPMP52272 730 aaKnown RBP eCLIP6.41□□□□□ -1.38
PRKDC-205ENST00000535375 ELLP55199 621 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-205ENST00000535375 GPSM2P81274 684 aa6.41□□□□□ -1.38
PRKDC-205ENST00000535375 ANO6Q4KMQ2 910 aa6.41□□□□□ -1.38
PRKDC-205ENST00000535375 ARHGAP29Q52LW3 1261 aa6.41□□□□□ -1.38
PRKDC-205ENST00000535375 KIAA0895LQ68EN5 471 aa6.41□□□□□ -1.38
PRKDC-205ENST00000535375 SFRP4Q6FHJ7 346 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-205ENST00000535375 TMEM108Q6UXF1 575 aa6.41□□□□□ -1.38
PRKDC-205ENST00000535375 GRASPQ7Z6J2 395 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-205ENST00000535375 CELF5Q8N6W0 485 aaKnown RBP6.41□□□□□ -1.38
PRKDC-205ENST00000535375 NELL1Q92832 810 aa6.41□□□□□ -1.38
PRKDC-205ENST00000535375 FAM136AQ96C01 138 aa6.41□□□□□ -1.38
PRKDC-205ENST00000535375 AMBRA1Q9C0C7 1298 aa6.41□□□□□ -1.38
PRKDC-205ENST00000535375 KLC4Q9NSK0 619 aa6.41□□□□□ -1.38
PRKDC-205ENST00000535375 HESX1Q9UBX0 185 aa6.41□□□□□ -1.38
PRKDC-205ENST00000535375 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-205ENST00000535375 THP07101 528 aa6.4□□□□□ -1.38
PRKDC-205ENST00000535375 ATXN1LP0C7T5 689 aaKnown RBP6.4□□□□□ -1.38
PRKDC-205ENST00000535375 CLK3P49761 638 aaKnown RBP6.4□□□□□ -1.38
PRKDC-205ENST00000535375 MAPK10P53779 464 aa6.4□□□□□ -1.38
PRKDC-205ENST00000535375 CACNA2D1P54289 1103 aa6.4□□□□□ -1.38
PRKDC-205ENST00000535375 FBXO42Q6P3S6 717 aa6.4□□□□□ -1.38
PRKDC-205ENST00000535375 RD3Q7Z3Z2 195 aa6.4□□□□□ -1.38
PRKDC-205ENST00000535375 PEG10Q86TG7 708 aaKnown RBP6.4□□□□□ -1.38
PRKDC-205ENST00000535375 ARHGEF25Q86VW2 580 aa6.4□□□□□ -1.38
PRKDC-205ENST00000535375 FKBP10Q96AY3 582 aa6.4□□□□□ -1.38
PRKDC-205ENST00000535375 LRFN3Q9BTN0 628 aa6.4□□□□□ -1.38
PRKDC-205ENST00000535375 TMX2Q9Y320 296 aa6.4□□□□□ -1.38
PRKDC-205ENST00000535375 GOLGA6CA6NDK9 693 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 GOLGA6BA6NDN3 693 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 ADM5C9JUS6 153 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 ERC2O15083 957 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 PPM1GO15355 546 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-205ENST00000535375 TUSC2O75896 110 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 DNAJB5O75953 348 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 GOLGA6DP0CG33 693 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 PXNP49023 591 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-205ENST00000535375 TOB1P50616 345 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-205ENST00000535375 BOP1Q14137 746 aaKnown RBP6.39□□□□□ -1.39
PRKDC-205ENST00000535375 MLC1Q15049 377 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 NXNQ6DKJ4 435 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 NPNTQ6UXI9 565 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 ZNF783Q6ZMS7 281 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 TCEAL8Q8IYN2 117 aa6.39□□□□□ -1.39
PRKDC-205ENST00000535375 MAGEB6Q8N7X4 407 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms