RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 BORCS6Q96GS4 357 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 NAA15Q9BXJ9 866 aaKnown RBP13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 KCNF1Q9H3M0 494 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 ANKFY1Q9P2R3 1169 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 CDH7Q9ULB5 785 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 ZFP37Q9Y6Q3 630 aaPredicted RBP13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 PTPRZ1P23471 2315 aaPredicted RBP13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 ZFHX2Q9C0A1 2572 aaPredicted RBP13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 GTPBP10A4D1E9 387 aaKnown RBP13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 STX10O60499 249 aa13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 AKAP3O75969 853 aa13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 GARTP22102 1010 aa13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 RPL9P32969 192 aaKnown RBP13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 ARID5BQ14865 1188 aa13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 NOLC1Q14978 699 aaKnown RBP eCLIP13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 SLC10A6Q3KNW5 377 aa13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 ARMCX5Q6P1M9 558 aa13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 RTL10Q7L3V2 364 aa13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 KIAA1524Q8TCG1 905 aa13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 C18orf25Q96B23 403 aaPredicted RBP13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 RTP3Q9BQQ7 232 aa13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 KIAA1586Q9HCI6 787 aa13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 KCND1Q9NSA2 647 aa13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 POLIQ9UNA4 740 aa13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 STYXL1Q9Y6J8 313 aa13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 NUMBLQ9Y6R0 609 aa13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 VWA8A3KMH1 1905 aa13.24□□□□□ -0.29
CHRDL2-209ENST00000534276 KRBA1A5PL33 1030 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 SYN3O14994 580 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 FECHP22830 423 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 MCL1Q07820 350 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 SEZ6Q53EL9 994 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 VARS2Q5ST30 1063 aaKnown RBP13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 SLFN12LQ6IEE8 588 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 SLC8B1Q6J4K2 584 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 INTS8Q75QN2 995 aaKnown RBP13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 FAM186BQ8IYM0 893 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 TC2NQ8N9U0 490 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 XXYLT1Q8NBI6 393 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 ST13P5Q8NFI4 369 aaPredicted RBP13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 ZNF461Q8TAF7 563 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 ITFG1Q8TB96 612 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 FGF13Q92913 245 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 EEF2KMTQ96G04 330 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 DOCK6Q96HP0 2047 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 RPP25Q9BUL9 199 aaKnown RBP13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 SLC2A4RGQ9NR83 387 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 CAPN11Q9UMQ6 739 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 DAAM1Q9Y4D1 1078 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 NUB1Q9Y5A7 615 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 RIF1Q5UIP0 2472 aaKnown RBP13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 TRIP11Q15643 1979 aa13.23□□□□□ -0.29
CHRDL2-209ENST00000534276 PES1O00541 588 aaKnown RBP13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 CLIC2O15247 247 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 PMM2O15305 246 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 CLDN3O15551 220 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 TBC1D4O60343 1298 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 EXOC3O60645 756 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 MFAP3LO75121 409 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 ABLIM3O94929 683 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 AFPP02771 609 aaKnown RBP13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 GYPCP04921 128 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 SKILP12757 684 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 CCZ1BP86790 482 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 CCZ1P86791 482 aaPredicted RBP13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 ROR1Q01973 937 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 KCNH2Q12809 1159 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 MRPL58Q14197 206 aaKnown RBP13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 SYCP1Q15431 976 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 CEP135Q66GS9 1140 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 PARM1Q6UWI2 310 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 USP37Q86T82 979 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 CCDC105Q8IYK2 499 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 GPR152Q8TDT2 470 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 FGF14Q92915 247 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 HAPLN2Q9GZV7 340 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 NUCKS1Q9H1E3 243 aaKnown RBP13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 HCFC1R1Q9NWW0 138 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 DNMT3BQ9UBC3 853 aaKnown RBP13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 CA14Q9ULX7 337 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 SIK3Q9Y2K2 1263 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 ARHGEF37A1IGU5 675 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 PROB1E7EW31 1015 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 H7C4K7 107 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 P4HA2O15460 535 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 GFRA3O60609 400 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 LDHAP00338 332 aaKnown RBP13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 CLTAP09496 248 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 KRT13P13646 458 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 NBL1P41271 181 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 CASP4P49662 377 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 PABPC1LQ4VXU2 614 aaKnown RBP13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 DTWD2Q8NBA8 298 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 ZNF397Q8NF99 534 aaPredicted RBP13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 SLC35C1Q96A29 364 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 BICD1Q96G01 975 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 SUSD3Q96L08 255 aa13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 ZNF830Q96NB3 372 aaPredicted RBP13.22□□□□□ -0.29
CHRDL2-209ENST00000534276 TTYH3Q9C0H2 523 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms