RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	RHD	Q02161	417 aa		5.62	□□□□□ -1.51
ATM-223	ENST00000533979	IL10RA	Q13651	578 aa		5.62	□□□□□ -1.51
ATM-223	ENST00000533979	SIM2	Q14190	667 aa	Predicted RBP	5.62	□□□□□ -1.51
ATM-223	ENST00000533979	UTP14C	Q5TAP6	766 aa	Known RBP	5.62	□□□□□ -1.51
ATM-223	ENST00000533979	STRIP1	Q5VSL9	837 aa		5.62	□□□□□ -1.51
ATM-223	ENST00000533979	SRL	Q86TD4	932 aa		5.62	□□□□□ -1.51
ATM-223	ENST00000533979	TTC7B	Q86TV6	843 aa		5.62	□□□□□ -1.51
ATM-223	ENST00000533979	FAM186B	Q8IYM0	893 aa		5.62	□□□□□ -1.51
ATM-223	ENST00000533979	DCBLD1	Q8N8Z6	715 aa		5.62	□□□□□ -1.51
ATM-223	ENST00000533979	RNF31	Q96EP0	1072 aa		5.62	□□□□□ -1.51
ATM-223	ENST00000533979	PTCD3	Q96EY7	689 aa	Known RBP	5.62	□□□□□ -1.51
ATM-223	ENST00000533979	TMX3	Q96JJ7	454 aa		5.62	□□□□□ -1.51
ATM-223	ENST00000533979	CLPTM1L	Q96KA5	538 aa		5.62	□□□□□ -1.51
ATM-223	ENST00000533979	SCLT1	Q96NL6	688 aa		5.62	□□□□□ -1.51
ATM-223	ENST00000533979	TAAR9	Q96RI9	348 aa		5.62	□□□□□ -1.51
ATM-223	ENST00000533979	NAA15	Q9BXJ9	866 aa	Known RBP	5.62	□□□□□ -1.51
ATM-223	ENST00000533979	UNKL	Q9H9P5	680 aa	Known RBP	5.62	□□□□□ -1.51
ATM-223	ENST00000533979	ALG13	Q9NP73	1137 aa	Known RBP	5.62	□□□□□ -1.51
ATM-223	ENST00000533979	JKAMP	Q9P055	326 aa		5.62	□□□□□ -1.51
ATM-223	ENST00000533979	HSFX1	Q9UBD0	423 aa		5.62	□□□□□ -1.51
ATM-223	ENST00000533979	TES	Q9UGI8	421 aa	Known RBP	5.62	□□□□□ -1.51
ATM-223	ENST00000533979	MORC2	Q9Y6X9	1032 aa	Predicted RBP	5.62	□□□□□ -1.51
ATM-223	ENST00000533979		A0A0U1RQG5	324 aa	Predicted RBP	5.61	□□□□□ -1.51
ATM-223	ENST00000533979		A6NNZ2	444 aa		5.61	□□□□□ -1.51
ATM-223	ENST00000533979	KIAA0355	O15063	1070 aa		5.61	□□□□□ -1.51
ATM-223	ENST00000533979	GRM6	O15303	877 aa		5.61	□□□□□ -1.51
ATM-223	ENST00000533979	SETSIP	P0DME0	302 aa		5.61	□□□□□ -1.51
ATM-223	ENST00000533979	SLC6A4	P31645	630 aa		5.61	□□□□□ -1.51
ATM-223	ENST00000533979	ALDH5A1	P51649	535 aa	Predicted RBP	5.61	□□□□□ -1.51
ATM-223	ENST00000533979	KIF23	Q02241	960 aa	Predicted RBP	5.61	□□□□□ -1.51
ATM-223	ENST00000533979	IFIT1B	Q5T764	474 aa	Known RBP	5.61	□□□□□ -1.51
ATM-223	ENST00000533979	KIF21A	Q7Z4S6	1674 aa		5.61	□□□□□ -1.51
ATM-223	ENST00000533979	CATIP	Q7Z7H3	387 aa		5.61	□□□□□ -1.51
ATM-223	ENST00000533979	ZNF354C	Q86Y25	554 aa		5.61	□□□□□ -1.51
ATM-223	ENST00000533979	LNX2	Q8N448	690 aa		5.61	□□□□□ -1.51
ATM-223	ENST00000533979	SLC35G2	Q8TBE7	412 aa		5.61	□□□□□ -1.51
ATM-223	ENST00000533979	CAGE1	Q8TC20	777 aa		5.61	□□□□□ -1.51
ATM-223	ENST00000533979	MYD88	Q99836	296 aa		5.61	□□□□□ -1.51
ATM-223	ENST00000533979	NRBP1	Q9UHY1	535 aa		5.61	□□□□□ -1.51
ATM-223	ENST00000533979	NEU2	Q9Y3R4	380 aa		5.61	□□□□□ -1.51
ATM-223	ENST00000533979	SPATA31D1	Q6ZQQ2	1576 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	SALL3	Q9BXA9	1300 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	CDHR4	A6H8M9	788 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	HAUS5	O94927	633 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	AGFG2	O95081	481 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	SBK3	P0C264	359 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	SLC5A1	P13866	664 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	AKAP5	P24588	427 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	CXCR5	P32302	372 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	CLK3	P49761	638 aa	Known RBP	5.6	□□□□□ -1.51
ATM-223	ENST00000533979	RARRES1	P49788	294 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	SLFN5	Q08AF3	891 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	ZNF169	Q14929	603 aa	Predicted RBP	5.6	□□□□□ -1.51
ATM-223	ENST00000533979	C3orf36	Q3SXR2	165 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	DPY19L2P1	Q6NXN4	242 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979		Q6ZNX1	250 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	PRIMA1	Q86XR5	153 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	FAM9B	Q8IZU0	186 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	SIMC1	Q8NDZ2	872 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	INSL6	Q9Y581	213 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	CFAP20	Q9Y6A4	193 aa	Known RBP	5.6	□□□□□ -1.51
ATM-223	ENST00000533979	DGKB	Q9Y6T7	804 aa		5.6	□□□□□ -1.51
ATM-223	ENST00000533979	NCAPD3	P42695	1498 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	PRRT4	C9JH25	899 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979		F5H423	210 aa	Predicted RBP	5.59	□□□□□ -1.51
ATM-223	ENST00000533979	TPP1	O14773	563 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	AP1G1	O43747	822 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	CTNND1	O60716	968 aa	Known RBP	5.59	□□□□□ -1.51
ATM-223	ENST00000533979	ZBED1	O96006	694 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	ANXA1	P04083	346 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	LDHC	P07864	332 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	ZKSCAN1	P17029	563 aa	Predicted RBP	5.59	□□□□□ -1.51
ATM-223	ENST00000533979	TM4SF4	P48230	202 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	DSC2	Q02487	901 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	TLE1	Q04724	770 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	LONRF1	Q17RB8	773 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	GADL1	Q6ZQY3	521 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	SRGAP1	Q7Z6B7	1085 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	NKAP	Q8N5F7	415 aa	Known RBP	5.59	□□□□□ -1.51
ATM-223	ENST00000533979	NSUN6	Q8TEA1	469 aa	Known RBP	5.59	□□□□□ -1.51
ATM-223	ENST00000533979	POF1B	Q8WVV4	589 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	AIFM2	Q9BRQ8	373 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	SELENOO	Q9BVL4	669 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	SIDT1	Q9NXL6	827 aa	Known RBP	5.59	□□□□□ -1.51
ATM-223	ENST00000533979	C9orf78	Q9NZ63	289 aa	Predicted RBP	5.59	□□□□□ -1.51
ATM-223	ENST00000533979	COX11	Q9Y6N1	276 aa		5.59	□□□□□ -1.51
ATM-223	ENST00000533979	LAMC3	Q9Y6N6	1575 aa		5.59	□□□□□ -1.52
ATM-223	ENST00000533979	PRAMEF33	A0A0G2JMD5	474 aa		5.58	□□□□□ -1.52
ATM-223	ENST00000533979		A0A1W2PS29	197 aa		5.58	□□□□□ -1.52
ATM-223	ENST00000533979	ZNF500	O60304	480 aa	Predicted RBP	5.58	□□□□□ -1.52
ATM-223	ENST00000533979	PRAMEF10	O60809	474 aa		5.58	□□□□□ -1.52
ATM-223	ENST00000533979	OFD1	O75665	1012 aa		5.58	□□□□□ -1.52
ATM-223	ENST00000533979	ZFPL1	O95159	310 aa		5.58	□□□□□ -1.52
ATM-223	ENST00000533979	FCER1A	P12319	257 aa		5.58	□□□□□ -1.52
ATM-223	ENST00000533979	FPGS	Q05932	587 aa		5.58	□□□□□ -1.52
ATM-223	ENST00000533979	ZNF844	Q08AG5	666 aa		5.58	□□□□□ -1.52
ATM-223	ENST00000533979	BIRC3	Q13489	604 aa		5.58	□□□□□ -1.52
ATM-223	ENST00000533979	ZNF267	Q14586	743 aa	Predicted RBP	5.58	□□□□□ -1.52
ATM-223	ENST00000533979	KHDC1	Q4VXA5	237 aa	Known RBP	5.58	□□□□□ -1.52
ATM-223	ENST00000533979	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	5.58	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms