RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 PDIA2Q13087 525 aaKnown RBP17.52■□□□□ 0.39
CTSB-228ENST00000533455 FYB2Q5VWT5 728 aa17.52■□□□□ 0.39
CTSB-228ENST00000533455 CAPRIN2Q6IMN6 1127 aaKnown RBP17.52■□□□□ 0.39
CTSB-228ENST00000533455 RSBN1LQ6PCB5 846 aaPredicted RBP17.52■□□□□ 0.39
CTSB-228ENST00000533455 PCGF5Q86SE9 256 aa17.52■□□□□ 0.39
CTSB-228ENST00000533455 SUPT20HQ8NEM7 779 aa17.52■□□□□ 0.39
CTSB-228ENST00000533455 FBXO41Q8TF61 875 aa17.52■□□□□ 0.39
CTSB-228ENST00000533455 AKT1S1Q96B36 256 aa17.52■□□□□ 0.39
CTSB-228ENST00000533455 DHRS4Q9BTZ2 278 aa17.52■□□□□ 0.39
CTSB-228ENST00000533455 ZNF341Q9BYN7 854 aa17.52■□□□□ 0.39
CTSB-228ENST00000533455 ZNF219Q9P2Y4 722 aaPredicted RBP17.52■□□□□ 0.39
CTSB-228ENST00000533455 A6NHS1 94 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 RPL7AP62424 266 aaKnown RBP17.51■□□□□ 0.39
CTSB-228ENST00000533455 MAP3K10Q02779 954 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 GRIK3Q13003 919 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 WDR72Q3MJ13 1102 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 UBR7Q8N806 425 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 LPAR1Q92633 364 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 GPRASP2Q96D09 838 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 SPDL1Q96EA4 605 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 POLR3FQ9H1D9 316 aaPredicted RBP17.51■□□□□ 0.39
CTSB-228ENST00000533455 HOMER2Q9NSB8 354 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 DDX56Q9NY93 547 aaKnown RBP17.51■□□□□ 0.39
CTSB-228ENST00000533455 RABGEF1Q9UJ41 708 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 ZFP69BQ9UJL9 534 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 AGO2Q9UKV8 859 aaKnown RBP17.51■□□□□ 0.39
CTSB-228ENST00000533455 IVNS1ABPQ9Y6Y0 642 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 CLUHO75153 1309 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 PARP14Q460N5 1801 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 FER1L6Q2WGJ9 1857 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 DOCK5Q9H7D0 1870 aa17.51■□□□□ 0.39
CTSB-228ENST00000533455 TESPA1A2RU30 521 aaPredicted RBP17.5■□□□□ 0.39
CTSB-228ENST00000533455 CBX6O95503 412 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 PIGRP01833 764 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 CALB1P05937 261 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 EPHB2P29323 1055 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 RAD23BP54727 409 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 TFDP3Q5H9I0 405 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 HP1BP3Q5SSJ5 553 aaPredicted RBP17.5■□□□□ 0.39
CTSB-228ENST00000533455 ZNF449Q6P9G9 518 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.5■□□□□ 0.39
CTSB-228ENST00000533455 SLC35B2Q8TB61 432 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 ASAP3Q8TDY4 903 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 MZB1Q8WU39 189 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 NUDCD1Q96RS6 583 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 GMLQ99445 158 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 CGRRF1Q99675 332 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 TMEM39BQ9GZU3 492 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 KCNG1Q9UIX4 513 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 ZMYND8Q9ULU4 1186 aaPredicted RBP17.5■□□□□ 0.39
CTSB-228ENST00000533455 LMNAP02545 664 aaKnown RBP17.5■□□□□ 0.39
CTSB-228ENST00000533455 TROVE2P10155 538 aaKnown RBP eCLIP17.5■□□□□ 0.39
CTSB-228ENST00000533455 RXRBP28702 533 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 SSTR3P32745 418 aaPredicted RBP17.5■□□□□ 0.39
CTSB-228ENST00000533455 PHBP35232 272 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 CDKN2BP42772 138 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 NOP14P78316 857 aaKnown RBP17.5■□□□□ 0.39
CTSB-228ENST00000533455 RNASELQ05823 741 aaKnown RBP17.5■□□□□ 0.39
CTSB-228ENST00000533455 HIF1AQ16665 826 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 CTC1Q2NKJ3 1217 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 TAF1BQ53T94 588 aaPredicted RBP17.5■□□□□ 0.39
CTSB-228ENST00000533455 ADGRD1Q6QNK2 874 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 FAM83AQ86UY5 434 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 ZNF276Q8N554 614 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 NIPA2Q8N8Q9 360 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 ATP11CQ8NB49 1132 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 ANKFY1Q9P2R3 1169 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 PGAP2Q9UHJ9 254 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 NUB1Q9Y5A7 615 aa17.5■□□□□ 0.39
CTSB-228ENST00000533455 ZNF541Q9H0D2 1346 aa17.49■□□□□ 0.39
CTSB-228ENST00000533455 TM9SF1O15321 606 aa17.49■□□□□ 0.39
CTSB-228ENST00000533455 SKAP2O75563 359 aaPredicted RBP17.49■□□□□ 0.39
CTSB-228ENST00000533455 LSM8O95777 96 aaKnown RBP17.49■□□□□ 0.39
CTSB-228ENST00000533455 KRT4P19013 534 aa17.49■□□□□ 0.39
CTSB-228ENST00000533455 GLRA2P23416 452 aa17.49■□□□□ 0.39
CTSB-228ENST00000533455 TAP1Q03518 808 aa17.49■□□□□ 0.39
CTSB-228ENST00000533455 MAPK6Q16659 721 aa17.49■□□□□ 0.39
CTSB-228ENST00000533455 KLHL38Q2WGJ6 581 aa17.49■□□□□ 0.39
CTSB-228ENST00000533455 ARHGEF16Q5VV41 709 aa17.49■□□□□ 0.39
CTSB-228ENST00000533455 CAPN12Q6ZSI9 719 aa17.49■□□□□ 0.39
CTSB-228ENST00000533455 DHX37Q8IY37 1157 aaKnown RBP17.49■□□□□ 0.39
CTSB-228ENST00000533455 MICAL1Q8TDZ2 1067 aa17.49■□□□□ 0.39
CTSB-228ENST00000533455 ZNF606Q8WXB4 792 aa17.49■□□□□ 0.39
CTSB-228ENST00000533455 ACSS3Q9H6R3 686 aa17.49■□□□□ 0.39
CTSB-228ENST00000533455 CYP26B1Q9NR63 512 aa17.49■□□□□ 0.39
CTSB-228ENST00000533455 SNCAIPQ9Y6H5 919 aa17.49■□□□□ 0.39
CTSB-228ENST00000533455 E7ESA3 106 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 ABLIM1O14639 778 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 MAFGO15525 162 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 PSAPP07602 524 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 ATP6V1C1P21283 382 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 CCND2P30279 289 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 CDC25CP30307 473 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 ACOT2P49753 483 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 IRX1P78414 480 aaPredicted RBP17.48■□□□□ 0.39
CTSB-228ENST00000533455 OGDHQ02218 1023 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 PIGHQ14442 188 aaPredicted RBP17.48■□□□□ 0.39
CTSB-228ENST00000533455 PPP1R15BQ5SWA1 713 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 ZFYVE27Q5T4F4 411 aa17.48■□□□□ 0.39
CTSB-228ENST00000533455 DNAJC24Q6P3W2 148 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms