RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 ITGA11Q9UKX5 1188 aa20.4■□□□□ 0.86
SSH3-209ENST00000532600 TICRRQ7Z2Z1 1910 aa20.39■□□□□ 0.86
SSH3-209ENST00000532600 TULP1O00294 542 aaPredicted RBP20.39■□□□□ 0.85
SSH3-209ENST00000532600 GFRA3O60609 400 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 HAPLN1P10915 354 aaPredicted RBP20.39■□□□□ 0.85
SSH3-209ENST00000532600 CMA1P23946 247 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 PNPLA4P41247 253 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 AMPD3Q01432 767 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 FZD5Q13467 585 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 GPIHBP1Q8IV16 184 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 MAML2Q8IZL2 1156 aaPredicted RBP20.39■□□□□ 0.85
SSH3-209ENST00000532600 ZNF687Q8N1G0 1237 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 LRRC52Q8N7C0 313 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 LRRC3BQ96PB8 259 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 PKMYT1Q99640 499 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 GZF1Q9H116 711 aaPredicted RBP20.39■□□□□ 0.85
SSH3-209ENST00000532600 MAGEF1Q9HAY2 307 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 LTB4R2Q9NPC1 389 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 AGPAT3Q9NRZ7 376 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 INTS13Q9NVM9 706 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 GDAP2Q9NXN4 497 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 HPSEQ9Y251 543 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 ASB3Q9Y575 518 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 PATJQ8NI35 1801 aa20.39■□□□□ 0.85
SSH3-209ENST00000532600 CACNA1IQ9P0X4 2223 aa20.38■□□□□ 0.85
SSH3-209ENST00000532600 FAM237AA0A1B0GTK4 181 aa20.38■□□□□ 0.85
SSH3-209ENST00000532600 A0A1B0GVL5 298 aa20.38■□□□□ 0.85
SSH3-209ENST00000532600 ARNTLO00327 626 aa20.38■□□□□ 0.85
SSH3-209ENST00000532600 KIAA0391O15091 583 aaKnown RBP20.38■□□□□ 0.85
SSH3-209ENST00000532600 PFKFB1P16118 471 aa20.38■□□□□ 0.85
SSH3-209ENST00000532600 TARSP26639 723 aaKnown RBP20.38■□□□□ 0.85
SSH3-209ENST00000532600 AFMP43652 599 aa20.38■□□□□ 0.85
SSH3-209ENST00000532600 BFSP1Q12934 665 aa20.38■□□□□ 0.85
SSH3-209ENST00000532600 TPRG1Q6ZUI0 275 aa20.38■□□□□ 0.85
SSH3-209ENST00000532600 STXBP4Q6ZWJ1 553 aa20.38■□□□□ 0.85
SSH3-209ENST00000532600 LIMS2Q7Z4I7 341 aa20.38■□□□□ 0.85
SSH3-209ENST00000532600 NELFCDQ8IXH7 590 aa20.38■□□□□ 0.85
SSH3-209ENST00000532600 THEM5Q8N1Q8 247 aa20.38■□□□□ 0.85
SSH3-209ENST00000532600 CACTINQ8WUQ7 758 aaKnown RBP20.38■□□□□ 0.85
SSH3-209ENST00000532600 TRMT61BQ9BVS5 477 aaKnown RBP20.38■□□□□ 0.85
SSH3-209ENST00000532600 SERTAD1Q9UHV2 236 aa20.38■□□□□ 0.85
SSH3-209ENST00000532600 NUP210Q8TEM1 1887 aaPredicted RBP20.37■□□□□ 0.85
SSH3-209ENST00000532600 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.37■□□□□ 0.85
SSH3-209ENST00000532600 A0A1W2PQ27 194 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 A0A1W2PQ64 194 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 A0A1W2PQD8 194 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 PRR23AA6NEV1 266 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 ZNF233A6NK53 670 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 FAM170BA6NMN3 283 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 HEPACAM2A8MVW5 462 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 ACTN4O43707 911 aaKnown RBP20.37■□□□□ 0.85
SSH3-209ENST00000532600 KLRC4O43908 158 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 PSMC3P17980 439 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 ACAT1P24752 427 aaKnown RBP20.37■□□□□ 0.85
SSH3-209ENST00000532600 TUFMP49411 452 aaKnown RBP20.37■□□□□ 0.85
SSH3-209ENST00000532600 GPR15P49685 360 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 RBP5P82980 135 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 UBXN2BQ14CS0 331 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 BMT2Q1RMZ1 405 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 SOWAHAQ2M3V2 549 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 MGAT5BQ3V5L5 792 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 TMEM150AQ86TG1 271 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 STKLD1Q8NE28 680 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 GIPC2Q8TF65 315 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 DNASE1L2Q92874 299 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 SLC39A2Q9NP94 309 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 ABI2Q9NYB9 513 aaPredicted RBP20.37■□□□□ 0.85
SSH3-209ENST00000532600 FAM13BQ9NYF5 915 aa20.37■□□□□ 0.85
SSH3-209ENST00000532600 GABRDO14764 452 aa20.36■□□□□ 0.85
SSH3-209ENST00000532600 CLIC2O15247 247 aa20.36■□□□□ 0.85
SSH3-209ENST00000532600 KRT19P08727 400 aa20.36■□□□□ 0.85
SSH3-209ENST00000532600 TMEM191BP0C7N4 346 aa20.36■□□□□ 0.85
SSH3-209ENST00000532600 GABRR2P28476 465 aa20.36■□□□□ 0.85
SSH3-209ENST00000532600 GDI1P31150 447 aa20.36■□□□□ 0.85
SSH3-209ENST00000532600 NDUFA8P51970 172 aa20.36■□□□□ 0.85
SSH3-209ENST00000532600 C1orf210Q8IVY1 113 aa20.36■□□□□ 0.85
SSH3-209ENST00000532600 MFSD6LQ8IWD5 586 aa20.36■□□□□ 0.85
SSH3-209ENST00000532600 SPPL2BQ8TCT7 592 aa20.36■□□□□ 0.85
SSH3-209ENST00000532600 C2orf15Q8WU43 125 aaKnown RBP20.36■□□□□ 0.85
SSH3-209ENST00000532600 OSBPL6Q9BZF3 934 aa20.36■□□□□ 0.85
SSH3-209ENST00000532600 GPR88Q9GZN0 384 aa20.36■□□□□ 0.85
SSH3-209ENST00000532600 ATXN3LQ9H3M9 355 aa20.36■□□□□ 0.85
SSH3-209ENST00000532600 BRD9Q9H8M2 597 aa20.36■□□□□ 0.85
SSH3-209ENST00000532600 DDX43Q9NXZ2 648 aaKnown RBP20.36■□□□□ 0.85
SSH3-209ENST00000532600 SNX9Q9Y5X1 595 aa20.36■□□□□ 0.85
SSH3-209ENST00000532600 DENND4CQ5VZ89 1909 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 OBSL1O75147 1896 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 UBE4BO95155 1302 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 PVALEFA0A1B0GWK0 134 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 HUS1O60921 280 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 GADD45BO75293 160 aaPredicted RBP20.35■□□□□ 0.85
SSH3-209ENST00000532600 HMGA1P17096 107 aaKnown RBP20.35■□□□□ 0.85
SSH3-209ENST00000532600 CYP4F8P98187 520 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 SMARCB1Q12824 385 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 SNRNP35Q16560 246 aaKnown RBP20.35■□□□□ 0.85
SSH3-209ENST00000532600 INTS6LQ5JSJ4 861 aaKnown RBP20.35■□□□□ 0.85
SSH3-209ENST00000532600 SDHAF4Q5VUM1 108 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 CLEC17AQ6ZS10 378 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 ITIH5Q86UX2 942 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 ARID3BQ8IVW6 561 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms