RNA–Protein interactions for RNA: ENST00000532044.1

AP003040.1-201, humanhuman

BASIC

Gene AP003040.1, Length 1,024 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003040.1-201ENST00000532044 NDRG2Q9UN36 371 aaKnown RBP13.75□□□□□ -0.21
AP003040.1-201ENST00000532044 SMG5Q9UPR3 1016 aaKnown RBP13.75□□□□□ -0.21
AP003040.1-201ENST00000532044 LAMA1P25391 3075 aa13.75□□□□□ -0.21
AP003040.1-201ENST00000532044 PTPRJQ12913 1337 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 KPNA7A9QM74 516 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 TADA3O75528 432 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 F11P03951 625 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 GARTP22102 1010 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 CCNE1P24864 410 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 CTHP32929 405 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 HOXD13P35453 343 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 SOX9P48436 509 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 TUFMP49411 452 aaKnown RBP13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 POSTNQ15063 836 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 RRAGBQ5VZM2 374 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 ARMCX5Q6P1M9 558 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 ITIH5Q86UX2 942 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 GLIS3Q8NEA6 775 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 RASSF8Q8NHQ8 419 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 SPPL2BQ8TCT7 592 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 POMGNT1Q8WZA1 660 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 CBWD1Q9BRT8 395 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 SLITRK6Q9H5Y7 841 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 C2orf42Q9NWW7 574 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 CCDC39Q9UFE4 941 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 L1RE1Q9UN81 338 aa13.74□□□□□ -0.21
AP003040.1-201ENST00000532044 SPECC1L-ADORA2AF8WAN1 911 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 K7ESF4 209 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 CYP4F8P98187 520 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 SATB1Q01826 763 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 CCINQ13939 588 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 CCDC142Q17RM4 750 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 SV2CQ496J9 727 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 ARHGAP29Q52LW3 1261 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 GPR158Q5T848 1215 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 C1orf228Q6PIY5 440 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 SV2BQ7L1I2 683 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 OSTM1Q86WC4 334 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 PDCL2Q8N4E4 241 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 LRRC52Q8N7C0 313 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 SAAL1Q96ER3 474 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 ZFYVE19Q96K21 471 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 ACCSQ96QU6 501 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 SEPT5Q99719 369 aaPredicted RBP13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 FAM213AQ9BRX8 229 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 SLC46A2Q9BY10 475 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 ATXN3LQ9H3M9 355 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 TASP1Q9H6P5 420 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 C8orf33Q9H7E9 229 aaPredicted RBP13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 MRPL44Q9H9J2 332 aaKnown RBP13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 LMAN1LQ9HAT1 526 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 GDAP2Q9NXN4 497 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 TBC1D7Q9P0N9 293 aa13.73□□□□□ -0.21
AP003040.1-201ENST00000532044 SLC38A8A6NNN8 435 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 GABRDO14764 452 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 EXTL3O43909 919 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 CDC25CP30307 473 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 POLR2BP30876 1174 aaKnown RBP13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 PNPLA4P41247 253 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 CCR3P51677 355 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 CDR1P51861 262 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 NLRP12P59046 1061 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 ALCAMQ13740 583 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 CNNM4Q6P4Q7 775 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 CCDC73Q6ZRK6 1079 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 Q6ZS52 159 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 RALGPS2Q86X27 583 aaPredicted RBP13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 GPIHBP1Q8IV16 184 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 SPEM1Q8N4L4 309 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 LINC00301Q8NCQ3 95 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 SPATA18Q8TC71 538 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 ATRIPQ8WXE1 791 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 ZNF560Q96MR9 790 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 FAM83CQ9BQN1 747 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 ABCB6Q9NP58 842 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 PARD6AQ9NPB6 346 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 RBM12Q9NTZ6 932 aaKnown RBP13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 KBTBD4Q9NVX7 518 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 RBAKQ9NYW8 714 aaPredicted RBP13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 GTSE1Q9NYZ3 720 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 CCL26Q9Y258 94 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 PTPRDP23468 1912 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 GREB1Q4ZG55 1949 aa13.72□□□□□ -0.21
AP003040.1-201ENST00000532044 CNOT1A5YKK6 2376 aaKnown RBP13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 MED19A0JLT2 244 aaPredicted RBP13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 OTOL1A6NHN0 477 aaPredicted RBP13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 SOBPA7XYQ1 873 aa13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 GCNT3O95395 438 aa13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 ITGB3P05106 788 aa13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 HOXA6P31267 233 aa13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 HOXC13P31276 330 aa13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 GPR15P49685 360 aa13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 PLCB2Q00722 1185 aa13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 TNK2Q07912 1038 aa13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 EHHADHQ08426 723 aa13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 DMWDQ09019 674 aa13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 MGAT5BQ3V5L5 792 aa13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 EPM2AIP1Q7L775 607 aaPredicted RBP13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 METTL23Q86XA0 190 aa13.71□□□□□ -0.21
AP003040.1-201ENST00000532044 CMTM8Q8IZV2 173 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms