RNA–Protein interactions for RNA: ENST00000531178.1

CDK2AP2-204, Transcript of cyclin dependent kinase 2 associated protein 2, humanhuman

TSL 1 (best)

Gene CDK2AP2, Length 923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP2-204ENST00000531178 ORC1Q13415 861 aa16.3■□□□□ 0.2
CDK2AP2-204ENST00000531178 TAF3Q5VWG9 929 aa16.3■□□□□ 0.2
CDK2AP2-204ENST00000531178 ZNF571Q7Z3V5 609 aaPredicted RBP16.3■□□□□ 0.2
CDK2AP2-204ENST00000531178 ACOT1Q86TX2 421 aa16.3■□□□□ 0.2
CDK2AP2-204ENST00000531178 CRYBG2Q8N1P7 616 aa16.3■□□□□ 0.2
CDK2AP2-204ENST00000531178 ACBD6Q9BR61 282 aa16.3■□□□□ 0.2
CDK2AP2-204ENST00000531178 RWDD3Q9Y3V2 267 aa16.3■□□□□ 0.2
CDK2AP2-204ENST00000531178 NME7Q9Y5B8 376 aa16.3■□□□□ 0.2
CDK2AP2-204ENST00000531178 LCHNA4D1U4 455 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 GRXCR1A8MXD5 290 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 THAP12O43422 761 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 MED7O43513 233 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 AKR1B10O60218 316 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 OAZ2O95190 189 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 EFEMP2O95967 443 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 LINC00271P0C7V0 271 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 CYLC1P35663 651 aaPredicted RBP16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 KRT17Q04695 432 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 USP41Q3LFD5 358 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 FAM109BQ6ICB4 259 aaPredicted RBP16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 CEP57Q86XR8 500 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 SLC20A1Q8WUM9 679 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 ZNF606Q8WXB4 792 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 DDX1Q92499 740 aaKnown RBP16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 TTPALQ9BTX7 342 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 DPEP3Q9H4B8 488 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 STK39Q9UEW8 545 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 CDH9Q9ULB4 789 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 PCDHA11Q9Y5I1 949 aa16.29■□□□□ 0.2
CDK2AP2-204ENST00000531178 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 LINC01553A4QN01 128 aa16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 HCRTO43612 131 aa16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 PTPN1P18031 435 aaKnown RBP16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 ACAT1P24752 427 aaKnown RBP16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 BRD2P25440 801 aaKnown RBP16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 BMPR1AP36894 532 aa16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 KIF11P52732 1056 aa16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 MRPL58Q14197 206 aaKnown RBP16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 BMS1Q14692 1282 aaKnown RBP16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 STILQ15468 1287 aa16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 ASTE1Q2TB18 679 aaPredicted RBP16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 SGO2Q562F6 1265 aa16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 VARS2Q5ST30 1063 aaKnown RBP16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 RAD9BQ6WBX8 426 aa16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 TAS1R1Q7RTX1 841 aa16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 DDX53Q86TM3 631 aaKnown RBP16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 RNF168Q8IYW5 571 aaPredicted RBP16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 TFAP2BQ92481 460 aa16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 RTP3Q9BQQ7 232 aa16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 SYT15Q9BQS2 421 aa16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 SYT11Q9BT88 431 aa16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 PDCL3Q9H2J4 239 aa16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 SEPT11Q9NVA2 429 aaKnown RBP16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 ADAMTS1Q9UHI8 967 aa16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 EPN1Q9Y6I3 576 aaPredicted RBP16.28■□□□□ 0.2
CDK2AP2-204ENST00000531178 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.28■□□□□ 0.24e-7■■■■□ 21.5
CDK2AP2-204ENST00000531178 H7C4K7 107 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 CAPN15O75808 1086 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 FGF18O76093 207 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 NDUFA10O95299 355 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 SOD2P04179 222 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 MMEP08473 750 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 MYOGP15173 224 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 CHRNB2P17787 502 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 CTNNB1P35222 781 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 PSMC1P62191 440 aaKnown RBP16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 FMO1Q01740 532 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 PLCB3Q01970 1234 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 MTF1Q14872 753 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 CNGA2Q16280 664 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 SLC18A3Q16572 532 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 ZNF280DQ6N043 979 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 KIAA1841Q6NSI8 718 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 ANKS3Q6ZW76 656 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 GLYCTKQ8IVS8 523 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 B3GALNT2Q8NCR0 500 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 B3GALT6Q96L58 329 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 ZSWIM1Q9BR11 485 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 HERC2P3Q9BVR0 1158 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 PLVAPQ9BX97 442 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 VN1R3Q9BXE9 311 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 OXCT2Q9BYC2 517 aaPredicted RBP16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 CHST7Q9NS84 486 aa16.27■□□□□ 0.2
CDK2AP2-204ENST00000531178 OR6C75A6NL08 312 aa16.26■□□□□ 0.19
CDK2AP2-204ENST00000531178 EIF3CLB5ME19 914 aaKnown RBP16.26■□□□□ 0.19
CDK2AP2-204ENST00000531178 DDX3XO00571 662 aaKnown RBP eCLIP16.26■□□□□ 0.195e-13■■■■■ 26.8
CDK2AP2-204ENST00000531178 ATP2C2O75185 946 aa16.26■□□□□ 0.19
CDK2AP2-204ENST00000531178 IPO7O95373 1038 aaKnown RBP16.26■□□□□ 0.19
CDK2AP2-204ENST00000531178 CA3P07451 260 aa16.26■□□□□ 0.19
CDK2AP2-204ENST00000531178 TSPY1Q01534 308 aa16.26■□□□□ 0.19
CDK2AP2-204ENST00000531178 GFPT1Q06210 699 aaPredicted RBP16.26■□□□□ 0.19
CDK2AP2-204ENST00000531178 SPA17Q15506 151 aa16.26■□□□□ 0.19
CDK2AP2-204ENST00000531178 CTXN3Q4LDR2 81 aa16.26■□□□□ 0.19
CDK2AP2-204ENST00000531178 INTS6LQ5JSJ4 861 aaKnown RBP16.26■□□□□ 0.19
CDK2AP2-204ENST00000531178 RTP2Q5QGT7 225 aa16.26■□□□□ 0.19
CDK2AP2-204ENST00000531178 ARHGAP17Q68EM7 881 aa16.26■□□□□ 0.19
CDK2AP2-204ENST00000531178 TRIM72Q6ZMU5 477 aa16.26■□□□□ 0.19
CDK2AP2-204ENST00000531178 C12orf29Q8N999 325 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms