RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 PEX2P28328 305 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 SERPINB3P29508 390 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 TM4SF4P48230 202 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 RAB1AP62820 205 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 GNAI1P63096 354 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 MPP3Q13368 585 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 PLS1Q14651 629 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 PREPLQ4J6C6 727 aaPredicted RBP5.67□□□□□ -1.5
C11orf88-204ENST00000529661 CCDC157Q569K6 752 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 HEATR3Q7Z4Q2 680 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 CLNKQ7Z7G1 428 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 COL23A1Q86Y22 540 aaPredicted RBP5.67□□□□□ -1.5
C11orf88-204ENST00000529661 FAM186BQ8IYM0 893 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 PDPRQ8NCN5 879 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 ANKS1AQ92625 1134 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 TNIP3Q96KP6 325 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 NT5C1BQ96P26 610 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 MYD88Q99836 296 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 ARPC5LQ9BPX5 153 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 AIFM2Q9BRQ8 373 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 C22orf23Q9BZE7 217 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 BRD9Q9H8M2 597 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 NLRC4Q9NPP4 1024 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 LMBRD1Q9NUN5 540 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 PNPOQ9NVS9 261 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 VSX1Q9NZR4 365 aaPredicted RBP5.67□□□□□ -1.5
C11orf88-204ENST00000529661 ABCF2Q9UG63 623 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 ZNHIT2Q9UHR6 403 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 CFAP69A5D8W1 941 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 ZNF785A8K8V0 405 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 H3BUI4 141 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 OVOL3O00110 214 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 IFRD1O00458 451 aaPredicted RBP5.66□□□□□ -1.5
C11orf88-204ENST00000529661 TOR1BO14657 336 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 ESRRBO95718 433 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 NUDT3O95989 172 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 LMNAP02545 664 aaKnown RBP5.66□□□□□ -1.5
C11orf88-204ENST00000529661 KCNA2P16389 499 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 PHKA1P46020 1223 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 PIK3CGP48736 1102 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 FPGSQ05932 587 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 PIGFQ07326 219 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 POLD3Q15054 466 aaPredicted RBP5.66□□□□□ -1.5
C11orf88-204ENST00000529661 APOA5Q6Q788 366 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 OLFML1Q6UWY5 402 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 Q6ZNX1 250 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 CFAP52Q8N1V2 620 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 SH2D3CQ8N5H7 860 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 Q8NA96 180 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 PHKBQ93100 1093 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 FUBP1Q96AE4 644 aaKnown RBP5.66□□□□□ -1.5
C11orf88-204ENST00000529661 SLC35A4Q96G79 324 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 APIPQ96GX9 242 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 C1orf43Q9BWL3 253 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 ARMT1Q9H993 441 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 ZMAT3Q9HA38 289 aaKnown RBP5.66□□□□□ -1.5
C11orf88-204ENST00000529661 SIDT1Q9NXL6 827 aaKnown RBP5.66□□□□□ -1.5
C11orf88-204ENST00000529661 FEZ2Q9UHY8 353 aaPredicted RBP5.66□□□□□ -1.5
C11orf88-204ENST00000529661 TPCN1Q9ULQ1 816 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 DMTF1Q9Y222 760 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 MAST3O60307 1309 aa5.66□□□□□ -1.5
C11orf88-204ENST00000529661 PRAMEF33A0A0G2JMD5 474 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 CCDC195A0A1B0GUA6 201 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 A0A1W2PS29 197 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 KIAA0355O15063 1070 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 PRAMEF10O60809 474 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 MYL3P08590 195 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 FTH1P19P0C7X4 201 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 RPL17P18621 184 aaKnown RBP5.65□□□□□ -1.5
C11orf88-204ENST00000529661 PRDX5P30044 214 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 CXCR5P32302 372 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 MPLP40238 635 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 PIK3CBP42338 1070 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 ZNF135P52742 658 aaPredicted RBP5.65□□□□□ -1.5
C11orf88-204ENST00000529661 MC2RQ01718 297 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 ERCC6LQ2NKX8 1250 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 CD300EQ496F6 205 aaPredicted RBP5.65□□□□□ -1.5
C11orf88-204ENST00000529661 C10orf62Q5T681 223 aaPredicted RBP5.65□□□□□ -1.5
C11orf88-204ENST00000529661 TAPT1Q6NXT6 567 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 SRLQ86TD4 932 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 DNAJC10Q8IXB1 793 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 SSH3Q8TE77 659 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 TNPO1Q92973 898 aaKnown RBP5.65□□□□□ -1.5
C11orf88-204ENST00000529661 TBCBQ99426 244 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 APOL5Q9BWW9 433 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 RIOX1Q9H6W3 641 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 FNIP2Q9P278 1114 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 CTTNBP2NLQ9P2B4 639 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 CFAP97Q9P2B7 532 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 DAAM1Q9Y4D1 1078 aa5.65□□□□□ -1.5
C11orf88-204ENST00000529661 E9PLN8 166 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 PHGDHO43175 533 aaKnown RBP5.64□□□□□ -1.51
C11orf88-204ENST00000529661 MGEA5O60502 916 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 PPFIA2O75334 1257 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 ANXA1P04083 346 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 ZKSCAN1P17029 563 aaPredicted RBP5.64□□□□□ -1.51
C11orf88-204ENST00000529661 TYRP1P17643 537 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 NANOS3P60323 173 aaKnown RBP5.64□□□□□ -1.51
C11orf88-204ENST00000529661 RPS7P62081 194 aaKnown RBP5.64□□□□□ -1.51
C11orf88-204ENST00000529661 IFIT5Q13325 482 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms