RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 OCM2P0CE71 109 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 OCMP0CE72 109 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ATP6V1E1P36543 226 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 KCNJ6P48051 423 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 BLVRAP53004 296 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ST8SIA6P61647 398 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 CDC42EP1Q00587 391 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 PDK1Q15118 436 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 CCL15Q16663 113 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 C10orf120Q5SQS8 335 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ACAD10Q6JQN1 1059 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 TRAPPC11Q7Z392 1133 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 OR9Q1Q8NGQ5 310 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 CPB2Q96IY4 423 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 MAP3K14Q99558 947 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 POP1Q99575 1024 aaKnown RBP8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ERP44Q9BS26 406 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 C17orf80Q9BSJ5 609 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 PACSIN1Q9BY11 444 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 MANSC1Q9H8J5 431 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 GPBP1L1Q9HC44 474 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-220ENST00000529526 SLC39A10Q9ULF5 831 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 INO80Q9ULG1 1556 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-220ENST00000529526 LSP1P33241 339 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 CTCFP49711 727 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-220ENST00000529526 CUL2Q13617 745 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 SNX17Q15036 470 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ANKS3Q6ZW76 656 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 HS6ST3Q8IZP7 471 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 RAB42Q8N4Z0 105 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 GPRC5AQ8NFJ5 357 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ANKS1AQ92625 1134 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 CATSPERBQ9H7T0 1116 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ABI2Q9NYB9 513 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-220ENST00000529526 DUSP10Q9Y6W6 482 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 FOXP2O15409 715 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ACADSBP45954 432 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 HDAC4P56524 1084 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 CENPCQ03188 943 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 PTRHD1Q6GMV3 140 aaKnown RBP8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ZNF555Q8NEP9 628 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ACER1Q8TDN7 264 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 FAM162AQ96A26 154 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 SLC38A7Q9NVC3 462 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 SH3BP1Q9Y3L3 701 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 C5orf58C9J3I9 102 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 AP3B1O00203 1094 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ZBTB39O15060 712 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ARIH2O95376 493 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 RBP3P10745 1247 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 UBE3AQ05086 875 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ARHGEF7Q14155 803 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 TRADDQ15628 312 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 KCNT1Q5JUK3 1230 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 TRPM8Q7Z2W7 1104 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 PPIL6Q8IXY8 311 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 CLEC4FQ8N1N0 589 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ARMC2Q8NEN0 867 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ZNF669Q96BR6 464 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-220ENST00000529526 SGF29Q96ES7 293 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 MTMR12Q9C0I1 747 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 ZFYVE28Q9HCC9 887 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 PRMT7Q9NVM4 692 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-220ENST00000529526 HBP1O60381 514 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 SNRPAP09012 282 aaKnown RBP8.47□□□□□ -1.05
CTNND1-220ENST00000529526 CYP11B2P19099 503 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 SPRP35270 261 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-220ENST00000529526 ABCE1P61221 599 aaKnown RBP8.47□□□□□ -1.05
CTNND1-220ENST00000529526 NOTUMQ6P988 496 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 SRLQ86TD4 932 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 C11orf74Q86VG3 221 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 EPS8L3Q8TE67 593 aaKnown RBP8.47□□□□□ -1.05
CTNND1-220ENST00000529526 TFB1MQ8WVM0 346 aaKnown RBP8.47□□□□□ -1.05
CTNND1-220ENST00000529526 OLFM3Q96PB7 478 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 TMEM161AQ9NX61 479 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 TRIM66O15016 1216 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 ARP10275 920 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 HSD17B3P37058 310 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 OVGP1Q12889 678 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 C16orf89Q6UX73 402 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 DNAAF5Q86Y56 855 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 CBWD2Q8IUF1 395 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 PCDHB7Q9Y5E2 793 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 LOC100653049A0A140TA62 436 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-220ENST00000529526 M0QYT0 321 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 FOXN3O00409 490 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-220ENST00000529526 KRT34O76011 436 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 GEMIN4P57678 1058 aaKnown RBP8.47□□□□□ -1.05
CTNND1-220ENST00000529526 PATL1Q86TB9 770 aaKnown RBP8.47□□□□□ -1.05
CTNND1-220ENST00000529526 CHSY1Q86X52 802 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 ZNF513Q8N8E2 541 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-220ENST00000529526 CHST13Q8NET6 341 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 KCNB2Q92953 911 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 FOPNLQ96NB1 174 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 PNKPQ96T60 521 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 B2RBV5 119 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 FKBP9O95302 570 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 SLC25A27O95847 323 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms