RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 ABI2Q9NYB9 513 aaPredicted RBP16.86■□□□□ 0.29
CTSB-215ENST00000528965 CDV3Q9UKY7 258 aaKnown RBP16.86■□□□□ 0.29
CTSB-215ENST00000528965 NUP210Q8TEM1 1887 aaPredicted RBP16.86■□□□□ 0.29
CTSB-215ENST00000528965 PPP1R37O75864 691 aa16.85■□□□□ 0.29
CTSB-215ENST00000528965 PAPSS2O95340 614 aaPredicted RBP16.85■□□□□ 0.29
CTSB-215ENST00000528965 GCNT3O95395 438 aa16.85■□□□□ 0.29
CTSB-215ENST00000528965 LDHAP00338 332 aaKnown RBP16.85■□□□□ 0.29
CTSB-215ENST00000528965 HAPLN1P10915 354 aaPredicted RBP16.85■□□□□ 0.29
CTSB-215ENST00000528965 DDX6P26196 483 aaKnown RBP eCLIP16.85■□□□□ 0.29
CTSB-215ENST00000528965 AVPR1AP37288 418 aa16.85■□□□□ 0.29
CTSB-215ENST00000528965 CYP4F8P98187 520 aa16.85■□□□□ 0.29
CTSB-215ENST00000528965 SATB1Q01826 763 aa16.85■□□□□ 0.29
CTSB-215ENST00000528965 NFE2Q16621 373 aaPredicted RBP16.85■□□□□ 0.29
CTSB-215ENST00000528965 L1TD1Q5T7N2 865 aaKnown RBP16.85■□□□□ 0.29
CTSB-215ENST00000528965 WSCD1Q658N2 575 aa16.85■□□□□ 0.29
CTSB-215ENST00000528965 PRR23BQ6ZRT6 265 aa16.85■□□□□ 0.29
CTSB-215ENST00000528965 EFCAB13Q8IY85 973 aa16.85■□□□□ 0.29
CTSB-215ENST00000528965 SYNPOQ8N3V7 929 aa16.85■□□□□ 0.29
CTSB-215ENST00000528965 CACTINQ8WUQ7 758 aaKnown RBP16.85■□□□□ 0.29
CTSB-215ENST00000528965 OLFML3Q9NRN5 406 aa16.85■□□□□ 0.29
CTSB-215ENST00000528965 PCDHB5Q9Y5E4 795 aa16.85■□□□□ 0.29
CTSB-215ENST00000528965 PCDHB13Q9Y5F0 798 aa16.85■□□□□ 0.29
CTSB-215ENST00000528965 SRPRBQ9Y5M8 271 aaKnown RBP16.85■□□□□ 0.29
CTSB-215ENST00000528965 DCHS1Q96JQ0 3298 aa16.85■□□□□ 0.29
CTSB-215ENST00000528965 TULP1O00294 542 aaPredicted RBP16.84■□□□□ 0.29
CTSB-215ENST00000528965 HUS1O60921 280 aa16.84■□□□□ 0.29
CTSB-215ENST00000528965 PRAMEF12O95522 483 aa16.84■□□□□ 0.29
CTSB-215ENST00000528965 CNR2P34972 360 aa16.84■□□□□ 0.29
CTSB-215ENST00000528965 SOX9P48436 509 aa16.84■□□□□ 0.29
CTSB-215ENST00000528965 TFAMQ00059 246 aaKnown RBP16.84■□□□□ 0.29
CTSB-215ENST00000528965 BFSP1Q12934 665 aa16.84■□□□□ 0.29
CTSB-215ENST00000528965 ITPRIPL2Q3MIP1 535 aa16.84■□□□□ 0.29
CTSB-215ENST00000528965 CCDC73Q6ZRK6 1079 aa16.84■□□□□ 0.29
CTSB-215ENST00000528965 BRSK2Q8IWQ3 736 aa16.84■□□□□ 0.29
CTSB-215ENST00000528965 SYCP3Q8IZU3 236 aa16.84■□□□□ 0.29
CTSB-215ENST00000528965 FAM213AQ9BRX8 229 aa16.84■□□□□ 0.29
CTSB-215ENST00000528965 KIF9Q9HAQ2 790 aa16.84■□□□□ 0.29
CTSB-215ENST00000528965 RBAKQ9NYW8 714 aaPredicted RBP16.84■□□□□ 0.29
CTSB-215ENST00000528965 GTSE1Q9NYZ3 720 aa16.84■□□□□ 0.29
CTSB-215ENST00000528965 FBXO2Q9UK22 296 aaPredicted RBP16.84■□□□□ 0.29
CTSB-215ENST00000528965 CLIC4Q9Y696 253 aa16.84■□□□□ 0.29
CTSB-215ENST00000528965 WDR87Q6ZQQ6 2873 aa16.84■□□□□ 0.29
CTSB-215ENST00000528965 SOBPA7XYQ1 873 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 CSH1P0DML2 217 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 CSH2P0DML3 217 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 IDEP14735 1019 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 GARTP22102 1010 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 ADSSP30520 456 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 POLR2BP30876 1174 aaKnown RBP16.83■□□□□ 0.28
CTSB-215ENST00000528965 STAT6P42226 847 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 RPL10AP62906 217 aaKnown RBP16.83■□□□□ 0.28
CTSB-215ENST00000528965 MYL7Q01449 175 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 CUL4AQ13619 759 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 CRELD2Q6UXH1 353 aaPredicted RBP16.83■□□□□ 0.28
CTSB-215ENST00000528965 STXBP4Q6ZWJ1 553 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 USP49Q70CQ1 688 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.83■□□□□ 0.28
CTSB-215ENST00000528965 LONP2Q86WA8 852 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 GPIHBP1Q8IV16 184 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 CMTM8Q8IZV2 173 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 TMEM86AQ8N2M4 240 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 LRRC52Q8N7C0 313 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 SPATA18Q8TC71 538 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 GIPC2Q8TF65 315 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 LEO1Q8WVC0 666 aaPredicted RBP16.83■□□□□ 0.28
CTSB-215ENST00000528965 MRPS31Q92665 395 aaKnown RBP16.83■□□□□ 0.28
CTSB-215ENST00000528965 ZFYVE19Q96K21 471 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 IL21Q9HBE4 155 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 ABCB6Q9NP58 842 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 UXTQ9UBK9 157 aaPredicted RBP16.83■□□□□ 0.28
CTSB-215ENST00000528965 ITGA11Q9UKX5 1188 aa16.83■□□□□ 0.28
CTSB-215ENST00000528965 R3HCC1Q9Y3T6 440 aaKnown RBP16.83■□□□□ 0.28
CTSB-215ENST00000528965 ANK1P16157 1881 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 DMXL1Q9Y485 3027 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 MED19A0JLT2 244 aaPredicted RBP16.82■□□□□ 0.28
CTSB-215ENST00000528965 MYMKA6NI61 221 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 LRP3O75074 770 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 RETP07949 1114 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 AMPD2Q01433 879 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 SIM2Q14190 667 aaPredicted RBP16.82■□□□□ 0.28
CTSB-215ENST00000528965 PON2Q15165 354 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 TXNDC11Q6PKC3 985 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 Q6ZS52 159 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 TTC8Q8TAM2 541 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 EXOC4Q96A65 974 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 SAAL1Q96ER3 474 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 STRA6Q9BX79 667 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 TMEM206Q9H813 350 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 RBM12Q9NTZ6 932 aaKnown RBP16.82■□□□□ 0.28
CTSB-215ENST00000528965 TBC1D7Q9P0N9 293 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 AGAP1Q9UPQ3 857 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 SCN1AP35498 2009 aa16.82■□□□□ 0.28
CTSB-215ENST00000528965 TCHHQ07283 1943 aa16.81■□□□□ 0.28
CTSB-215ENST00000528965 KIAA0391O15091 583 aaKnown RBP16.81■□□□□ 0.28
CTSB-215ENST00000528965 EXTL3O43909 919 aa16.81■□□□□ 0.28
CTSB-215ENST00000528965 FOXD2O60548 495 aaPredicted RBP16.81■□□□□ 0.28
CTSB-215ENST00000528965 PRPF40AO75400 957 aaKnown RBP16.81■□□□□ 0.28
CTSB-215ENST00000528965 ITGB3P05106 788 aa16.81■□□□□ 0.28
CTSB-215ENST00000528965 TMEM191BP0C7N4 346 aa16.81■□□□□ 0.28
CTSB-215ENST00000528965 NLRP12P59046 1061 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms