RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 CSRP1P21291 193 aaKnown RBP11.42□□□□□ -0.58
CPSF1-203ENST00000527916 ALDH1A3P47895 512 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 OSTNP61366 133 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 AMPD2Q01433 879 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 CREB5Q02930 508 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 SOX4Q06945 474 aaPredicted RBP11.42□□□□□ -0.58
CPSF1-203ENST00000527916 GRSF1Q12849 480 aaKnown RBP eCLIP11.42□□□□□ -0.58
CPSF1-203ENST00000527916 MCM6Q14566 821 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 NOLC1Q14978 699 aaKnown RBP eCLIP11.42□□□□□ -0.58
CPSF1-203ENST00000527916 SLC10A6Q3KNW5 377 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 PLK5Q496M5 336 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 ARHGAP15Q53QZ3 475 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 TCEAL6Q6IPX3 200 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 GPBP1Q86WP2 473 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 MYCT1Q8N699 235 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 LRRC15Q8TF66 581 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 LARP4BQ92615 738 aaKnown RBP11.42□□□□□ -0.58
CPSF1-203ENST00000527916 TCEAL3Q969E4 200 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 ZFYVE19Q96K21 471 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 SUSD3Q96L08 255 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 OXCT2Q9BYC2 517 aaPredicted RBP11.42□□□□□ -0.58
CPSF1-203ENST00000527916 ST6GALNAC4Q9H4F1 302 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 PARVGQ9HBI0 331 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 STK17AQ9UEE5 414 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 CCDC39Q9UFE4 941 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 TBX20Q9UMR3 447 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 WASF3Q9UPY6 502 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 LOC400499M0QZD8 3231 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 PCNX2A6NKB5 2137 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 K7ELQ4 463 aaPredicted RBP11.41□□□□□ -0.58
CPSF1-203ENST00000527916 MEFVO15553 781 aaPredicted RBP11.41□□□□□ -0.58
CPSF1-203ENST00000527916 TRAK2O60296 914 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 FAM13AO94988 1023 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 ADRB2P07550 413 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 CLTAP09496 248 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 PDIA4P13667 645 aaKnown RBP11.41□□□□□ -0.58
CPSF1-203ENST00000527916 SPINK2P20155 84 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 HOXC13P31276 330 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 MCM4P33991 863 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 GTF2BQ00403 316 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 CACNB1Q02641 598 aaPredicted RBP11.41□□□□□ -0.58
CPSF1-203ENST00000527916 RING1Q06587 406 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 SLC39A14Q15043 492 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 ZBTB6Q15916 424 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 RNF19BQ6ZMZ0 732 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 GPIHBP1Q8IV16 184 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 BPIFB1Q8TDL5 484 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 GATA6Q92908 595 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 SNX21Q969T3 373 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 EXOC4Q96A65 974 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 EPSTI1Q96J88 318 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 FIZ1Q96SL8 496 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 SCNM1Q9BWG6 230 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 TMEM121BQ9BXQ6 578 aaPredicted RBP11.41□□□□□ -0.58
CPSF1-203ENST00000527916 DUSP15Q9H1R2 295 aaPredicted RBP11.41□□□□□ -0.58
CPSF1-203ENST00000527916 TMEM9BQ9NQ34 198 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 FBXO2Q9UK22 296 aaPredicted RBP11.41□□□□□ -0.58
CPSF1-203ENST00000527916 YIPF1Q9Y548 306 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 ASB3Q9Y575 518 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 LAMA5O15230 3695 aa11.41□□□□□ -0.58
CPSF1-203ENST00000527916 ASCC3Q8N3C0 2202 aaKnown RBP11.4□□□□□ -0.58
CPSF1-203ENST00000527916 CACNA1EQ15878 2313 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 TTC26A0AVF1 554 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 LNP1A1A4G5 178 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 BCLAF3A2AJT9 711 aaKnown RBP11.4□□□□□ -0.58
CPSF1-203ENST00000527916 KHNYNO15037 678 aaKnown RBP11.4□□□□□ -0.58
CPSF1-203ENST00000527916 OGTO15294 1046 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 CYP3A5P20815 502 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 LIG4P49917 911 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 POU5F1Q01860 360 aaKnown RBP11.4□□□□□ -0.58
CPSF1-203ENST00000527916 YWHAHQ04917 246 aaPredicted RBP11.4□□□□□ -0.58
CPSF1-203ENST00000527916 TNK2Q07912 1038 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 DHX8Q14562 1220 aaKnown RBP11.4□□□□□ -0.58
CPSF1-203ENST00000527916 TMEM196Q5HYL7 178 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 GPR158Q5T848 1215 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 ITIH5Q86UX2 942 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 C11orf74Q86VG3 221 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 TMC8Q8IU68 726 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 CD302Q8IX05 232 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 KRI1Q8N9T8 703 aaKnown RBP11.4□□□□□ -0.58
CPSF1-203ENST00000527916 BEST2Q8NFU1 509 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 RASSF8Q8NHQ8 419 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 DDX12PQ92771 950 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 HAPLN2Q9GZV7 340 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 ATXN3LQ9H3M9 355 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 ANKFY1Q9P2R3 1169 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 MTMR6Q9Y217 621 aa11.4□□□□□ -0.58
CPSF1-203ENST00000527916 NUP205Q92621 2012 aa11.4□□□□□ -0.59
CPSF1-203ENST00000527916 ABCA7Q8IZY2 2146 aa11.39□□□□□ -0.59
CPSF1-203ENST00000527916 GON4LQ3T8J9 2241 aa11.39□□□□□ -0.59
CPSF1-203ENST00000527916 A0A0B4J269 797 aa11.39□□□□□ -0.59
CPSF1-203ENST00000527916 XPOTO43592 962 aaKnown RBP11.39□□□□□ -0.59
CPSF1-203ENST00000527916 STX6O43752 255 aa11.39□□□□□ -0.59
CPSF1-203ENST00000527916 FAM189A1O60320 539 aa11.39□□□□□ -0.59
CPSF1-203ENST00000527916 TBCAO75347 108 aaKnown RBP11.39□□□□□ -0.59
CPSF1-203ENST00000527916 KRT18P05783 430 aaKnown RBP11.39□□□□□ -0.59
CPSF1-203ENST00000527916 HARSP12081 509 aaKnown RBP11.39□□□□□ -0.59
CPSF1-203ENST00000527916 PAX3P23760 479 aa11.39□□□□□ -0.59
CPSF1-203ENST00000527916 WEE1P30291 646 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms