RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 GIPC2Q8TF65 315 aa20.73■□□□□ 0.91
CAPN1-211ENST00000527739 LEO1Q8WVC0 666 aaPredicted RBP20.73■□□□□ 0.91
CAPN1-211ENST00000527739 SCFD1Q8WVM8 642 aa20.73■□□□□ 0.91
CAPN1-211ENST00000527739 LPIN3Q9BQK8 851 aa20.73■□□□□ 0.91
CAPN1-211ENST00000527739 TRMT61BQ9BVS5 477 aaKnown RBP20.73■□□□□ 0.91
CAPN1-211ENST00000527739 ATXN3LQ9H3M9 355 aa20.73■□□□□ 0.91
CAPN1-211ENST00000527739 BRD9Q9H8M2 597 aa20.73■□□□□ 0.91
CAPN1-211ENST00000527739 INTS13Q9NVM9 706 aa20.73■□□□□ 0.91
CAPN1-211ENST00000527739 L1RE1Q9UN81 338 aa20.73■□□□□ 0.91
CAPN1-211ENST00000527739 ZDHHC9Q9Y397 364 aa20.73■□□□□ 0.91
CAPN1-211ENST00000527739 TGFB1I1O43294 461 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 PFKFB1P16118 471 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 TNNI1P19237 187 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 CD72P21854 359 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 ACAT1P24752 427 aaKnown RBP20.72■□□□□ 0.91
CAPN1-211ENST00000527739 STARD6P59095 220 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 MYL7Q01449 175 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 SMARCB1Q12824 385 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 UBXN2BQ14CS0 331 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 SNRNP35Q16560 246 aaKnown RBP20.72■□□□□ 0.91
CAPN1-211ENST00000527739 TMC8Q8IU68 726 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 SPPL2BQ8TCT7 592 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 C2orf15Q8WU43 125 aaKnown RBP20.72■□□□□ 0.91
CAPN1-211ENST00000527739 PSMG2Q969U7 264 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 CCDC127Q96BQ5 260 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 PAGE5Q96GU1 130 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 HPDLQ96IR7 371 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 FNBP1Q96RU3 617 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 LRRC3Q9BY71 257 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 GPR88Q9GZN0 384 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 ZNF334Q9HCZ1 680 aaPredicted RBP20.72■□□□□ 0.91
CAPN1-211ENST00000527739 EXOC1Q9NV70 894 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 DDX43Q9NXZ2 648 aaKnown RBP20.72■□□□□ 0.91
CAPN1-211ENST00000527739 HSFX1Q9UBD0 423 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 SIX4Q9UIU6 781 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 PCDHB5Q9Y5E4 795 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 UBE4BO95155 1302 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 FAM186AA6NE01 2351 aa20.72■□□□□ 0.91
CAPN1-211ENST00000527739 KANSL1LA0AUZ9 987 aa20.71■□□□□ 0.91
CAPN1-211ENST00000527739 CMA1P23946 247 aa20.71■□□□□ 0.91
CAPN1-211ENST00000527739 FCARP24071 287 aa20.71■□□□□ 0.91
CAPN1-211ENST00000527739 GABRR2P28476 465 aa20.71■□□□□ 0.91
CAPN1-211ENST00000527739 PRKCQQ04759 706 aa20.71■□□□□ 0.91
CAPN1-211ENST00000527739 ARHGAP15Q53QZ3 475 aa20.71■□□□□ 0.91
CAPN1-211ENST00000527739 TPRG1Q6ZUI0 275 aa20.71■□□□□ 0.91
CAPN1-211ENST00000527739 YAF2Q8IY57 180 aa20.71■□□□□ 0.91
CAPN1-211ENST00000527739 XXYLT1Q8NBI6 393 aa20.71■□□□□ 0.91
CAPN1-211ENST00000527739 PI4K2AQ9BTU6 479 aa20.71■□□□□ 0.91
CAPN1-211ENST00000527739 HEBP1Q9NRV9 189 aa20.71■□□□□ 0.91
CAPN1-211ENST00000527739 TMLHEQ9NVH6 421 aa20.71■□□□□ 0.91
CAPN1-211ENST00000527739 ATP6V1DQ9Y5K8 247 aa20.71■□□□□ 0.91
CAPN1-211ENST00000527739 PTPRJQ12913 1337 aa20.71■□□□□ 0.91
CAPN1-211ENST00000527739 FAM170BA6NMN3 283 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 DPYSL4O14531 572 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 ACTN4O43707 911 aaKnown RBP20.7■□□□□ 0.9
CAPN1-211ENST00000527739 LRRN2O75325 713 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 PRPF40AO75400 957 aaKnown RBP20.7■□□□□ 0.9
CAPN1-211ENST00000527739 FGF19O95750 216 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 HAPLN1P10915 354 aaPredicted RBP20.7■□□□□ 0.9
CAPN1-211ENST00000527739 PSMC3P17980 439 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 GDI1P31150 447 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 EHHADHQ08426 723 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 KNOP1Q1ED39 458 aaKnown RBP20.7■□□□□ 0.9
CAPN1-211ENST00000527739 STXBP5Q5T5C0 1151 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 GPR158Q5T848 1215 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 WDR49Q8IV35 697 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 ADGRF2Q8IZF7 708 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 TMEM86AQ8N2M4 240 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 PJA1Q8NG27 643 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 CXorf38Q8TB03 319 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 GCNAQ96QF7 691 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 GDAP2Q9NXN4 497 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 NOTCH4Q99466 2003 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 DCHS1Q96JQ0 3298 aa20.7■□□□□ 0.9
CAPN1-211ENST00000527739 HEPACAM2A8MVW5 462 aa20.69■□□□□ 0.9
CAPN1-211ENST00000527739 ZNF263O14978 683 aa20.69■□□□□ 0.9
CAPN1-211ENST00000527739 EXOC3O60645 756 aa20.69■□□□□ 0.9
CAPN1-211ENST00000527739 CLSTN1O94985 981 aa20.69■□□□□ 0.9
CAPN1-211ENST00000527739 ATF6P18850 670 aa20.69■□□□□ 0.9
CAPN1-211ENST00000527739 SNRPFP62306 86 aaKnown RBP20.69■□□□□ 0.9
CAPN1-211ENST00000527739 NFE2Q16621 373 aaPredicted RBP20.69■□□□□ 0.9
CAPN1-211ENST00000527739 KMT5BQ4FZB7 885 aa20.69■□□□□ 0.9
CAPN1-211ENST00000527739 VITQ6UXI7 678 aa20.69■□□□□ 0.9
CAPN1-211ENST00000527739 GAREM2Q75VX8 874 aa20.69■□□□□ 0.9
CAPN1-211ENST00000527739 TRAPPC11Q7Z392 1133 aa20.69■□□□□ 0.9
CAPN1-211ENST00000527739 TOP6BLQ8N6T0 577 aa20.69■□□□□ 0.9
CAPN1-211ENST00000527739 MMS19Q96T76 1030 aa20.69■□□□□ 0.9
CAPN1-211ENST00000527739 ACBD6Q9BR61 282 aa20.69■□□□□ 0.9
CAPN1-211ENST00000527739 USP25Q9UHP3 1055 aa20.69■□□□□ 0.9
CAPN1-211ENST00000527739 GTF3C4Q9UKN8 822 aa20.69■□□□□ 0.9
CAPN1-211ENST00000527739 MTF2Q9Y483 593 aaPredicted RBP20.69■□□□□ 0.9
CAPN1-211ENST00000527739 COL4A3Q01955 1670 aa20.69■□□□□ 0.9
CAPN1-211ENST00000527739 KLRC4O43908 158 aa20.68■□□□□ 0.9
CAPN1-211ENST00000527739 SYKP43405 635 aa20.68■□□□□ 0.9
CAPN1-211ENST00000527739 LHX1P48742 406 aa20.68■□□□□ 0.9
CAPN1-211ENST00000527739 GPR15P49685 360 aa20.68■□□□□ 0.9
CAPN1-211ENST00000527739 CYP4F8P98187 520 aa20.68■□□□□ 0.9
CAPN1-211ENST00000527739 CYP24A1Q07973 514 aa20.68■□□□□ 0.9
CAPN1-211ENST00000527739 PSMD6Q15008 389 aa20.68■□□□□ 0.9
CAPN1-211ENST00000527739 SOWAHAQ2M3V2 549 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms