RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 SEC62Q99442 399 aaKnown RBP6.17□□□□□ -1.42
SF3B2-205ENST00000526653 SPON2Q9BUD6 331 aa6.17□□□□□ -1.42
SF3B2-205ENST00000526653 FTHL17Q9BXU8 183 aa6.17□□□□□ -1.42
SF3B2-205ENST00000526653 KRTAP9-3Q9BYQ3 159 aa6.17□□□□□ -1.42
SF3B2-205ENST00000526653 FAM49AQ9H0Q0 323 aaPredicted RBP6.17□□□□□ -1.42
SF3B2-205ENST00000526653 NAPBQ9H115 298 aa6.17□□□□□ -1.42
SF3B2-205ENST00000526653 TMX1Q9H3N1 280 aa6.17□□□□□ -1.42
SF3B2-205ENST00000526653 CWH43Q9H720 699 aa6.17□□□□□ -1.42
SF3B2-205ENST00000526653 SPATA6Q9NWH7 488 aaPredicted RBP6.17□□□□□ -1.42
SF3B2-205ENST00000526653 RTEL1Q9NZ71 1219 aa6.17□□□□□ -1.42
SF3B2-205ENST00000526653 PRR13Q9NZ81 148 aa6.17□□□□□ -1.42
SF3B2-205ENST00000526653 DLGAP2Q9P1A6 1054 aa6.17□□□□□ -1.42
SF3B2-205ENST00000526653 SUCOQ9UBS9 1254 aaKnown RBP6.17□□□□□ -1.42
SF3B2-205ENST00000526653 NRCAMQ92823 1304 aa6.17□□□□□ -1.42
SF3B2-205ENST00000526653 NAV1Q8NEY1 1877 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 C9IYK1 514 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 SLC30A4O14863 429 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 SHOXO15266 292 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 DHX16O60231 1041 aaKnown RBP6.16□□□□□ -1.42
SF3B2-205ENST00000526653 MYBP10242 640 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 PDHBP11177 359 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 FGFR1P11362 822 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 MARK3P27448 753 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 HOXA13P31271 388 aaPredicted RBP6.16□□□□□ -1.42
SF3B2-205ENST00000526653 SARSP49591 514 aaKnown RBP6.16□□□□□ -1.42
SF3B2-205ENST00000526653 MRPS6P82932 125 aaKnown RBP6.16□□□□□ -1.42
SF3B2-205ENST00000526653 CYP4F8P98187 520 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 PAK2Q13177 524 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 RTP2Q5QGT7 225 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 MARCH8Q5T0T0 291 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 ZKSCAN2Q63HK3 967 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 KIAA1841Q6NSI8 718 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 TAF2Q6P1X5 1199 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 DCLRE1AQ6PJP8 1040 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 TSSK4Q6SA08 328 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 KCNT2Q6UVM3 1135 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 LRRC55Q6ZSA7 311 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 TMC6Q7Z403 805 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 CABP7Q86V35 215 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 ADGRF4Q8IZF3 695 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 AUTS2Q8WXX7 1259 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 APPBP2Q92624 585 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 GPR20Q99678 358 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 ADAM2Q99965 735 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 PDCD2LQ9BRP1 358 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 TNFRSF12AQ9NP84 129 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 SPG21Q9NZD8 308 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 IGSF9Q9P2J2 1179 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 IMPACTQ9P2X3 320 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 ACSL6Q9UKU0 697 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 GINS2Q9Y248 185 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 LZTS1Q9Y250 596 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 MRPL11Q9Y3B7 192 aaKnown RBP6.16□□□□□ -1.42
SF3B2-205ENST00000526653 MTF2Q9Y483 593 aaPredicted RBP6.16□□□□□ -1.42
SF3B2-205ENST00000526653 BAZ2AQ9UIF9 1905 aaKnown RBP6.16□□□□□ -1.42
SF3B2-205ENST00000526653 WDR19Q8NEZ3 1342 aa6.16□□□□□ -1.42
SF3B2-205ENST00000526653 DENND3A2RUS2 1198 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 NUDT19A8MXV4 375 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 NT5C1B-RDH14C9J2C7 533 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 MGEA5O60502 916 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 GSNP06396 782 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 LAG3P18627 525 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 NCLP19338 710 aaKnown RBP6.15□□□□□ -1.42
SF3B2-205ENST00000526653 NOVP48745 357 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 PPFIA1Q13136 1202 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 SMC1AQ14683 1233 aaKnown RBP6.15□□□□□ -1.42
SF3B2-205ENST00000526653 PTPN14Q15678 1187 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 CDC37Q16543 378 aaPredicted RBP6.15□□□□□ -1.42
SF3B2-205ENST00000526653 VMACQ2NL98 169 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 CCDC149Q6ZUS6 474 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 GPR149Q86SP6 731 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 IGDCC3Q8IVU1 814 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 IL31RAQ8NI17 732 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 DHRS1Q96LJ7 313 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 ZNF558Q96NG5 402 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 JMJD8Q96S16 334 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 DSCC1Q9BVC3 393 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 CELF4Q9BZC1 486 aaKnown RBP6.15□□□□□ -1.42
SF3B2-205ENST00000526653 XYLT2Q9H1B5 865 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 ATP6V0A4Q9HBG4 840 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 TUBE1Q9UJT0 475 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 ZNF215Q9UL58 517 aaPredicted RBP6.15□□□□□ -1.42
SF3B2-205ENST00000526653 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.15□□□□□ -1.42
SF3B2-205ENST00000526653 PCDHA1Q9Y5I3 950 aa6.15□□□□□ -1.42
SF3B2-205ENST00000526653 BPTFQ12830 3046 aa6.15□□□□□ -1.43
SF3B2-205ENST00000526653 ABCB11O95342 1321 aa6.15□□□□□ -1.43
SF3B2-205ENST00000526653 MAST4O15021 2626 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 M0QZ92 97 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 SMARCA5O60264 1052 aaPredicted RBP6.14□□□□□ -1.43
SF3B2-205ENST00000526653 TBC1D4O60343 1298 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 FOXD2O60548 495 aaPredicted RBP6.14□□□□□ -1.43
SF3B2-205ENST00000526653 N4BP1O75113 896 aaKnown RBP6.14□□□□□ -1.43
SF3B2-205ENST00000526653 CD72P21854 359 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 NEDD9Q14511 834 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 BMS1Q14692 1282 aaKnown RBP6.14□□□□□ -1.43
SF3B2-205ENST00000526653 PGM5Q15124 567 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 NONOQ15233 471 aaKnown RBP eCLIP6.14□□□□□ -1.43
SF3B2-205ENST00000526653 QRICH1Q2TAL8 776 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 LETM2Q2VYF4 491 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 ZNF528Q3MIS6 628 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms