RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 CCHCR1Q8TD31 782 aa21.52■■□□□ 1.04
SMIM3-201ENST00000526627 SPATC1LQ9H0A9 340 aa21.52■■□□□ 1.04
SMIM3-201ENST00000526627 PTPRHQ9HD43 1115 aa21.52■■□□□ 1.04
SMIM3-201ENST00000526627 GPRC5DQ9NZD1 345 aa21.52■■□□□ 1.04
SMIM3-201ENST00000526627 POLR2AP24928 1970 aaKnown RBP21.52■■□□□ 1.04
SMIM3-201ENST00000526627 C3orf70A6NLC5 250 aaPredicted RBP21.51■■□□□ 1.03
SMIM3-201ENST00000526627 GSTA1P08263 222 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 TFDP3Q5H9I0 405 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 SWT1Q5T5J6 900 aaKnown RBP21.51■■□□□ 1.03
SMIM3-201ENST00000526627 DENND1BQ6P3S1 775 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 SRRM1Q8IYB3 904 aaKnown RBP21.51■■□□□ 1.03
SMIM3-201ENST00000526627 GDAP1Q8TB36 358 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 FAM167AQ96KS9 214 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 SAYSD1Q9NPB0 183 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 PPME1Q9Y570 386 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 CD2APQ9Y5K6 639 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 ANK1P16157 1881 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 SOCS7O14512 581 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 PECAM1P16284 738 aaPredicted RBP21.51■■□□□ 1.03
SMIM3-201ENST00000526627 VCPP55072 806 aaKnown RBP21.51■■□□□ 1.03
SMIM3-201ENST00000526627 TFAMQ00059 246 aaKnown RBP21.51■■□□□ 1.03
SMIM3-201ENST00000526627 TAP1Q03518 808 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 FASTKD3Q14CZ7 662 aaKnown RBP21.51■■□□□ 1.03
SMIM3-201ENST00000526627 MAPK6Q16659 721 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 ERICH1Q86X53 443 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 NCAPG2Q86XI2 1143 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 NKD2Q969F2 451 aaPredicted RBP21.51■■□□□ 1.03
SMIM3-201ENST00000526627 SGSM3Q96HU1 749 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 GPR20Q99678 358 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 USP15Q9Y4E8 981 aaPredicted RBP21.51■■□□□ 1.03
SMIM3-201ENST00000526627 ACTL7BQ9Y614 415 aa21.51■■□□□ 1.03
SMIM3-201ENST00000526627 LGR5O75473 907 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 MNAT1P51948 309 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 GPS1Q13098 491 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 TRPC3Q13507 836 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 HSDL1Q3SXM5 330 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 PTPN20Q4JDL3 420 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 ARFGAP1Q8N6T3 406 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 HAUS1Q96CS2 278 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 FGD4Q96M96 766 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 CCDC77Q9BR77 488 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 TJP2Q9UDY2 1190 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 CYTH4Q9UIA0 394 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 TPX2Q9ULW0 747 aaKnown RBP21.5■■□□□ 1.03
SMIM3-201ENST00000526627 POLIQ9UNA4 740 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 MXD4Q14582 209 aaPredicted RBP21.5■■□□□ 1.03
SMIM3-201ENST00000526627 SURF1Q15526 300 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 ZNF699Q32M78 642 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 RNASEH2BQ5TBB1 312 aaKnown RBP21.5■■□□□ 1.03
SMIM3-201ENST00000526627 NUGGCQ68CJ6 796 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 ZBTB8OSQ8IWT0 167 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 SLC35B2Q8TB61 432 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 TCP11Q8WWU5 503 aa21.5■■□□□ 1.03
SMIM3-201ENST00000526627 DDX56Q9NY93 547 aaKnown RBP21.5■■□□□ 1.03
SMIM3-201ENST00000526627 LRRD1A4D1F6 860 aa21.49■■□□□ 1.03
SMIM3-201ENST00000526627 TSHZ1Q6ZSZ6 1077 aa21.49■■□□□ 1.03
SMIM3-201ENST00000526627 CEP128Q6ZU80 1094 aa21.49■■□□□ 1.03
SMIM3-201ENST00000526627 CEP120Q8N960 986 aa21.49■■□□□ 1.03
SMIM3-201ENST00000526627 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.49■■□□□ 1.03
SMIM3-201ENST00000526627 B4GALT4O60513 344 aa21.49■■□□□ 1.03
SMIM3-201ENST00000526627 ITGAVP06756 1048 aa21.49■■□□□ 1.03
SMIM3-201ENST00000526627 GJB1P08034 283 aa21.49■■□□□ 1.03
SMIM3-201ENST00000526627 RFC1P35251 1148 aaPredicted RBP21.49■■□□□ 1.03
SMIM3-201ENST00000526627 MORF4L2Q15014 288 aa21.49■■□□□ 1.03
SMIM3-201ENST00000526627 EEF1DP3Q658K8 133 aa21.49■■□□□ 1.03
SMIM3-201ENST00000526627 CGB2Q6NT52 195 aa21.49■■□□□ 1.03
SMIM3-201ENST00000526627 MPZL3Q6UWV2 235 aa21.49■■□□□ 1.03
SMIM3-201ENST00000526627 THNSL1Q8IYQ7 743 aa21.49■■□□□ 1.03
SMIM3-201ENST00000526627 TMEM130Q8N3G9 435 aa21.49■■□□□ 1.03
SMIM3-201ENST00000526627 RIBC1Q8N443 379 aaPredicted RBP21.49■■□□□ 1.03
SMIM3-201ENST00000526627 ZNF668Q96K58 619 aaPredicted RBP21.49■■□□□ 1.03
SMIM3-201ENST00000526627 CFAP57Q96MR6 1250 aa21.49■■□□□ 1.03
SMIM3-201ENST00000526627 TMEM121Q9BTD3 319 aa21.49■■□□□ 1.03
SMIM3-201ENST00000526627 B4GALT5O43286 388 aa21.48■■□□□ 1.03
SMIM3-201ENST00000526627 GAS2O43903 313 aaKnown RBP21.48■■□□□ 1.03
SMIM3-201ENST00000526627 PSMC4P43686 418 aa21.48■■□□□ 1.03
SMIM3-201ENST00000526627 GTF2A1P52655 376 aaPredicted RBP21.48■■□□□ 1.03
SMIM3-201ENST00000526627 SLC25A11Q02978 314 aaKnown RBP21.48■■□□□ 1.03
SMIM3-201ENST00000526627 TMED2Q15363 201 aa21.48■■□□□ 1.03
SMIM3-201ENST00000526627 FAM228AQ86W67 206 aa21.48■■□□□ 1.03
SMIM3-201ENST00000526627 PARP9Q8IXQ6 854 aa21.48■■□□□ 1.03
SMIM3-201ENST00000526627 KIAA0319LQ8IZA0 1049 aa21.48■■□□□ 1.03
SMIM3-201ENST00000526627 JOSD2Q8TAC2 188 aa21.48■■□□□ 1.03
SMIM3-201ENST00000526627 FZD8Q9H461 694 aa21.48■■□□□ 1.03
SMIM3-201ENST00000526627 CD248Q9HCU0 757 aa21.48■■□□□ 1.03
SMIM3-201ENST00000526627 PRKAG3Q9UGI9 489 aa21.48■■□□□ 1.03
SMIM3-201ENST00000526627 AGAP1Q9UPQ3 857 aa21.48■■□□□ 1.03
SMIM3-201ENST00000526627 PAPPA2Q9BXP8 1791 aa21.48■■□□□ 1.03
SMIM3-201ENST00000526627 CNMDO75829 334 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 IL1R2P27930 398 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 RAP1GAPP47736 663 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 OSTNP61366 133 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 ADCY1Q08828 1119 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 GALNTL6Q49A17 601 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 HP1BP3Q5SSJ5 553 aaPredicted RBP21.47■■□□□ 1.03
SMIM3-201ENST00000526627 POLNQ7Z5Q5 900 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 CDR2LQ86X02 465 aaPredicted RBP21.47■■□□□ 1.03
SMIM3-201ENST00000526627 TDRPQ86YL5 185 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 TRAPPC12Q8WVT3 735 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 MAGEB18Q96M61 343 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms