RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 EEF1DP3Q658K8 133 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 TCEAL6Q6IPX3 200 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 VITQ6UXI7 678 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 Q6ZS52 159 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 CDR2LQ86X02 465 aaPredicted RBP11.87□□□□□ -0.51
NEDD8-204ENST00000526430 SYNPOQ8N3V7 929 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 KIAA0895Q8NCT3 520 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 GSTCDQ8NEC7 633 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 ZNF507Q8TCN5 953 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 TCEAL3Q969E4 200 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 CCDC51Q96ER9 411 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 CPB2Q96IY4 423 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 ZBTB45Q96K62 511 aaPredicted RBP11.87□□□□□ -0.51
NEDD8-204ENST00000526430 IFT74Q96LB3 600 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 ACO2Q99798 780 aaKnown RBP11.87□□□□□ -0.51
NEDD8-204ENST00000526430 SMOC1Q9H4F8 434 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 C2orf42Q9NWW7 574 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 CACNA2D2Q9NY47 1150 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 TBX20Q9UMR3 447 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 GIT1Q9Y2X7 761 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 PTPRDP23468 1912 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 PLXNB3Q9ULL4 1909 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 CELSR3Q9NYQ7 3312 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 LNP1A1A4G5 178 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 FAM221BA6H8Z2 402 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 TISP43B9A030 160 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 INO80B-WBP1J3KQ70 363 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 TADA2AO75478 443 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 PRPF6O94906 941 aaKnown RBP11.86□□□□□ -0.51
NEDD8-204ENST00000526430 PIGRP01833 764 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 PRKCBP05771 671 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 CCDC192P0DO97 292 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 AXLP30530 894 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 EFNA5P52803 228 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 DMP1Q13316 513 aaPredicted RBP11.86□□□□□ -0.51
NEDD8-204ENST00000526430 HSP90AA2PQ14568 343 aaPredicted RBP11.86□□□□□ -0.51
NEDD8-204ENST00000526430 KCNB1Q14721 858 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 CAMK4Q16566 473 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 WDR44Q5JSH3 913 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 PRSS36Q5K4E3 855 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 CCDC65Q8IXS2 484 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 DEPTORQ8TB45 409 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 SCFD1Q8WVM8 642 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 TARS2Q9BW92 718 aaKnown RBP11.86□□□□□ -0.51
NEDD8-204ENST00000526430 APOL6Q9BWW8 343 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 EIF2AQ9BY44 585 aaKnown RBP11.86□□□□□ -0.51
NEDD8-204ENST00000526430 C2orf40Q9H1Z8 148 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 CXCL16Q9H2A7 254 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 ZHX3Q9H4I2 956 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 C8orf33Q9H7E9 229 aaPredicted RBP11.86□□□□□ -0.51
NEDD8-204ENST00000526430 TRPV4Q9HBA0 871 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 RBM12Q9NTZ6 932 aaKnown RBP11.86□□□□□ -0.51
NEDD8-204ENST00000526430 SEL1LQ9UBV2 794 aa11.86□□□□□ -0.51
NEDD8-204ENST00000526430 PTPRBP23467 1997 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 ZNF638Q14966 1978 aaKnown RBP11.85□□□□□ -0.51
NEDD8-204ENST00000526430 ARHGEF37A1IGU5 675 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 ZNF263O14978 683 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 ADAM12O43184 909 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 TGFB1I1O43294 461 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 HYAL3O43820 417 aaPredicted RBP11.85□□□□□ -0.51
NEDD8-204ENST00000526430 FAM189A1O60320 539 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 TBCAO75347 108 aaKnown RBP11.85□□□□□ -0.51
NEDD8-204ENST00000526430 PTPN2P17706 415 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 ADSSP30520 456 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 ELAVL2Q12926 359 aaKnown RBP11.85□□□□□ -0.51
NEDD8-204ENST00000526430 CCINQ13939 588 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 MAPK6Q16659 721 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 PLK5Q496M5 336 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 FAM26FQ5R3K3 315 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 FAM171A1Q5VUB5 890 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 NOTUMQ6P988 496 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 RBM43Q6ZSC3 357 aaKnown RBP11.85□□□□□ -0.51
NEDD8-204ENST00000526430 MFSD6LQ8IWD5 586 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 ZBTB8OSQ8IWT0 167 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 ZSWIM2Q8NEG5 633 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 SMARCD2Q92925 531 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 PRIMPOLQ96LW4 560 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 RNF39Q9H2S5 420 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 CLSTN2Q9H4D0 955 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 PDZD7Q9H5P4 517 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 SLC39A2Q9NP94 309 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 PRMT7Q9NVM4 692 aaPredicted RBP11.85□□□□□ -0.51
NEDD8-204ENST00000526430 KCNG1Q9UIX4 513 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 MAN1B1Q9UKM7 699 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 TNFSF13BQ9Y275 285 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 GDAQ9Y2T3 454 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 STYXL1Q9Y6J8 313 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 DENND4CQ5VZ89 1909 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 CEP192Q8TEP8 1941 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 PLXND1Q9Y4D7 1925 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 PHLPP2Q6ZVD8 1323 aa11.85□□□□□ -0.51
NEDD8-204ENST00000526430 BCLAF3A2AJT9 711 aaKnown RBP11.84□□□□□ -0.51
NEDD8-204ENST00000526430 WDR27A2RRH5 827 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 MYBPHLA2RUH7 354 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 K7ENM7 598 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 NRG2O14511 850 aaPredicted RBP11.84□□□□□ -0.51
NEDD8-204ENST00000526430 ZNF197O14709 1029 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 CD44P16070 742 aaKnown RBP11.84□□□□□ -0.51
NEDD8-204ENST00000526430 OR1D2P34982 312 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 SMTNP53814 917 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms