RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 WASP42768 502 aa3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 PSMC1P62191 440 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 IL10RAQ13651 578 aa3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 DAZAP2Q15038 168 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 Q4G0T1 1027 aa3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 TAF7LQ5H9L4 462 aa3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 RBM20Q5T481 1227 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 KIAA1161Q6NSJ0 714 aa3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 CATSPERGQ6ZRH7 1159 aa3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 IRF2BP2Q7Z5L9 587 aa3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 AMOTL1Q8IY63 956 aa3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 GALNT16Q8N428 558 aa3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 C5orf34Q96MH7 638 aa3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 OSBPL9Q96SU4 736 aa3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 ZNF277Q9NRM2 450 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-219ENST00000526299 CYP2D7A0A087X1C5 515 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 QSOX1O00391 747 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 ANXA1P04083 346 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 PDHA1P08559 390 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 CYP2C18P33260 490 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 RAB39AQ14964 217 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 TRIP6Q15654 476 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 PCID2Q5JVF3 399 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 TAF2Q6P1X5 1199 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 CHSY1Q86X52 802 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 NANOGP1Q8N7R0 232 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 NRACQ8N912 160 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 PNLDC1Q8NA58 520 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 KLHDC4Q8TBB5 520 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 COG1Q8WTW3 980 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 CHAC2Q8WUX2 184 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 ATRIPQ8WXE1 791 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 TBC1D5Q92609 795 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 HDAC10Q969S8 669 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 FAM136AQ96C01 138 aa3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 TRNAU1APQ9NX07 287 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-219ENST00000526299 H0YIZ8 118 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 SOCS2O14508 198 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 PPM1DO15297 605 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 NXPH3O95157 252 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 EYA4O95677 639 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 CPEP16870 476 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 CHRM3P20309 590 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 ITGALP20701 1170 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 EEFSECP57772 596 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 AARS2Q5JTZ9 985 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 MIS18BP1Q6P0N0 1132 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 ANKRD16Q6P6B7 361 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 DLK2Q6UY11 383 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 AFAP1L2Q8N4X5 818 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 PSD4Q8NDX1 1056 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 WDR66Q8TBY9 1149 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 SCAMP4Q969E2 229 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 MRGPRX4Q96LA9 322 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 BRD9Q9H8M2 597 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 MRPS18AQ9NVS2 196 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 ETAA1Q9NY74 926 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 DLL3Q9NYJ7 618 aa3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 FNDC1Q4ZHG4 1894 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-219ENST00000526299 ZNF785A8K8V0 405 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 ENPP3O14638 875 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 SGTAO43765 313 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 NDUFS2O75306 463 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 BCAR3O75815 825 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 CD6P30203 668 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 ERVK-21P61565 698 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 HOXA4Q00056 320 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 TLE1Q04724 770 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 HABP2Q14520 560 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 ACAP2Q15057 778 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 KHDC1Q4VXA5 237 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 CCDC93Q567U6 631 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 VPS53Q5VIR6 699 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 PGM2L1Q6PCE3 622 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 NAPRTQ6XQN6 538 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 NPM2Q86SE8 214 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 C8orf58Q8NAV2 365 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 PRSS3P2Q8NHM4 247 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 NSMCE1Q8WV22 266 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 MARK4Q96L34 752 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 DMRTA2Q96SC8 542 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 VRK1Q99986 396 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 SERHLQ9NQF3 203 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 CALCOCO1Q9P1Z2 691 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 TUBD1Q9UJT1 453 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 LIMCH1Q9UPQ0 1083 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 RAD54BQ9Y620 910 aa3.69□□□□□ -1.82
ECHDC1-219ENST00000526299 E5RJQ4 531 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 F2RL2O00254 374 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 GPR39O43194 453 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 HTRA2O43464 458 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 SOAT2O75908 522 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 GJB1P08034 283 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 PHKA1P46020 1223 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 ZNF135P52742 658 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 SLC16A1P53985 500 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 PDE1AP54750 535 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 CYP4F2P78329 520 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 KLF1Q13351 362 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 SNAPC2Q13487 334 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms