RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 MYO16Q9Y6X6 1858 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 FAM170BA6NMN3 283 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 HEPACAM2A8MVW5 462 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 PRAMEF12O95522 483 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 LDHAP00338 332 aaKnown RBP12.98□□□□□ -0.33
SSBP3-210ENST00000525990 GABRR2P28476 465 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 GDI1P31150 447 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 ME1P48163 572 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 PFKPQ01813 784 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 PRKCQQ04759 706 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 FZD5Q13467 585 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 NT5DC4Q86YG4 428 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 IQUBQ8NA54 791 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 RDH13Q8NBN7 331 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 FAM200AQ8TCP9 573 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 KCNG4Q8TDN1 519 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 SCFD1Q8WVM8 642 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 SHDQ96IW2 340 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 ZFYVE19Q96K21 471 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 C7orf25Q9BPX7 421 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 PI4K2AQ9BTU6 479 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 TRMT61BQ9BVS5 477 aaKnown RBP12.98□□□□□ -0.33
SSBP3-210ENST00000525990 SMG9Q9H0W8 520 aaKnown RBP12.98□□□□□ -0.33
SSBP3-210ENST00000525990 CUEDC2Q9H467 287 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 TMEM206Q9H813 350 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 INTS13Q9NVM9 706 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 SERTAD1Q9UHV2 236 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 DSEQ9UL01 958 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 NDRG2Q9UN36 371 aaKnown RBP12.98□□□□□ -0.33
SSBP3-210ENST00000525990 SNX9Q9Y5X1 595 aa12.98□□□□□ -0.33
SSBP3-210ENST00000525990 ZFHX2Q9C0A1 2572 aaPredicted RBP12.97□□□□□ -0.33
SSBP3-210ENST00000525990 ARNTLO00327 626 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 EIF3DO15371 548 aaKnown RBP eCLIP12.97□□□□□ -0.33
SSBP3-210ENST00000525990 ATP2C2O75185 946 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 TMEM191BP0C7N4 346 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 SP9P0CG40 484 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 HAPLN1P10915 354 aaPredicted RBP12.97□□□□□ -0.33
SSBP3-210ENST00000525990 PSMC3P17980 439 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 SOX9P48436 509 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 CYP2J2P51589 502 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 WDR44Q5JSH3 913 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 GPR158Q5T848 1215 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 CNNM4Q6P4Q7 775 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 UNC13DQ70J99 1090 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 TMEM150AQ86TG1 271 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 ARID3BQ8IVW6 561 aaPredicted RBP12.97□□□□□ -0.33
SSBP3-210ENST00000525990 C1orf210Q8IVY1 113 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 THEM5Q8N1Q8 247 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 LEMD2Q8NC56 503 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 TTC8Q8TAM2 541 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 ZNF507Q8TCN5 953 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 PKMYT1Q99640 499 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 GZF1Q9H116 711 aaPredicted RBP12.97□□□□□ -0.33
SSBP3-210ENST00000525990 ATXN3LQ9H3M9 355 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 TRPV4Q9HBA0 871 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 SLC39A2Q9NP94 309 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 AGPAT3Q9NRZ7 376 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 DDX43Q9NXZ2 648 aaKnown RBP12.97□□□□□ -0.33
SSBP3-210ENST00000525990 ITGA11Q9UKX5 1188 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 KIAA1549LQ6ZVL6 1849 aa12.97□□□□□ -0.33
SSBP3-210ENST00000525990 SLC38A8A6NNN8 435 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 ACTN4O43707 911 aaKnown RBP12.96□□□□□ -0.33
SSBP3-210ENST00000525990 KLRC4O43908 158 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 HMGA1P17096 107 aaKnown RBP12.96□□□□□ -0.33
SSBP3-210ENST00000525990 PAX3P23760 479 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 CYP2F1P24903 491 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 SOWAHAQ2M3V2 549 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 MFSD6LQ8IWD5 586 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 ZNF687Q8N1G0 1237 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 LRRC52Q8N7C0 313 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 SPPL2BQ8TCT7 592 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 CACTINQ8WUQ7 758 aaKnown RBP12.96□□□□□ -0.33
SSBP3-210ENST00000525990 DNASE1L2Q92874 299 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 NKD2Q969F2 451 aaPredicted RBP12.96□□□□□ -0.33
SSBP3-210ENST00000525990 ELMO3Q96BJ8 720 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 SPATA6Q9NWH7 488 aaPredicted RBP12.96□□□□□ -0.33
SSBP3-210ENST00000525990 RCOR1Q9UKL0 485 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 GTF3C4Q9UKN8 822 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 ASB3Q9Y575 518 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 NME7Q9Y5B8 376 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 ATG2BQ96BY7 2078 aa12.96□□□□□ -0.33
SSBP3-210ENST00000525990 MYH10P35580 1976 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 A0A1B0GVL5 298 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 MYBPHLA2RUH7 354 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 ZNF233A6NK53 670 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 ZNF263O14978 683 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 HUS1O60921 280 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 PRPF40AO75400 957 aaKnown RBP12.95□□□□□ -0.34
SSBP3-210ENST00000525990 TADA3O75528 432 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 LMO2P25791 158 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 PNPLA4P41247 253 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 TUFMP49411 452 aaKnown RBP12.95□□□□□ -0.34
SSBP3-210ENST00000525990 CASP4P49662 377 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 PSMC1P62191 440 aaKnown RBP12.95□□□□□ -0.34
SSBP3-210ENST00000525990 AMPD3Q01432 767 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 SNRNP35Q16560 246 aaKnown RBP12.95□□□□□ -0.34
SSBP3-210ENST00000525990 DDR2Q16832 855 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 INTS6LQ5JSJ4 861 aaKnown RBP12.95□□□□□ -0.34
SSBP3-210ENST00000525990 TSSK4Q6SA08 328 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 ZNF852Q6ZMS4 543 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms