RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 VEPH1Q14D04 833 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 MLF2Q15773 248 aaPredicted RBP19.95■□□□□ 0.78
CAPN1-203ENST00000525013 KNOP1Q1ED39 458 aaKnown RBP19.95■□□□□ 0.78
CAPN1-203ENST00000525013 SLC44A4Q53GD3 710 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 TMC8Q8IU68 726 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 CCDC105Q8IYK2 499 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 DTWD2Q8NBA8 298 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 CXorf38Q8TB03 319 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 ZSCAN18Q8TBC5 510 aaPredicted RBP19.95■□□□□ 0.78
CAPN1-203ENST00000525013 SPPL2BQ8TCT7 592 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 C2orf15Q8WU43 125 aaKnown RBP19.95■□□□□ 0.78
CAPN1-203ENST00000525013 PSMG2Q969U7 264 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 CCDC127Q96BQ5 260 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 FNBP1Q96RU3 617 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 LPIN3Q9BQK8 851 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 LRRC3Q9BY71 257 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 FOXQ1Q9C009 403 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 DDX43Q9NXZ2 648 aaKnown RBP19.95■□□□□ 0.78
CAPN1-203ENST00000525013 USP25Q9UHP3 1055 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 SIT1Q9Y3P8 196 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 DCNP07585 359 aaKnown RBP19.94■□□□□ 0.78
CAPN1-203ENST00000525013 TNNI1P19237 187 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 FCARP24071 287 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 VIPR2P41587 438 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 MYL7Q01449 175 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 GRM2Q14416 872 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 BMT2Q1RMZ1 405 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 WDR49Q8IV35 697 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 TMEM86AQ8N2M4 240 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 GIPC2Q8TF65 315 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 HPDLQ96IR7 371 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 GPR88Q9GZN0 384 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 SCAND2PQ9GZW5 306 aaPredicted RBP19.94■□□□□ 0.78
CAPN1-203ENST00000525013 ATXN3LQ9H3M9 355 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 BRD9Q9H8M2 597 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 ZNF334Q9HCZ1 680 aaPredicted RBP19.94■□□□□ 0.78
CAPN1-203ENST00000525013 GDAP2Q9NXN4 497 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 PCDHB5Q9Y5E4 795 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 CACNA1IQ9P0X4 2223 aa19.94■□□□□ 0.78
CAPN1-203ENST00000525013 KLRC4O43908 158 aa19.93■□□□□ 0.78
CAPN1-203ENST00000525013 ATF6P18850 670 aa19.93■□□□□ 0.78
CAPN1-203ENST00000525013 ACAT1P24752 427 aaKnown RBP19.93■□□□□ 0.78
CAPN1-203ENST00000525013 GABRR2P28476 465 aa19.93■□□□□ 0.78
CAPN1-203ENST00000525013 SYKP43405 635 aa19.93■□□□□ 0.78
CAPN1-203ENST00000525013 STARD6P59095 220 aa19.93■□□□□ 0.78
CAPN1-203ENST00000525013 PRKCQQ04759 706 aa19.93■□□□□ 0.78
CAPN1-203ENST00000525013 CYP24A1Q07973 514 aa19.93■□□□□ 0.78
CAPN1-203ENST00000525013 BECN1Q14457 450 aa19.93■□□□□ 0.78
CAPN1-203ENST00000525013 NFE2Q16621 373 aaPredicted RBP19.93■□□□□ 0.78
CAPN1-203ENST00000525013 KMT5BQ4FZB7 885 aa19.93■□□□□ 0.78
CAPN1-203ENST00000525013 ADGRF2Q8IZF7 708 aa19.93■□□□□ 0.78
CAPN1-203ENST00000525013 TOP6BLQ8N6T0 577 aa19.93■□□□□ 0.78
CAPN1-203ENST00000525013 TRMT61BQ9BVS5 477 aaKnown RBP19.93■□□□□ 0.78
CAPN1-203ENST00000525013 TMLHEQ9NVH6 421 aa19.93■□□□□ 0.78
CAPN1-203ENST00000525013 CGNQ9P2M7 1197 aaKnown RBP19.93■□□□□ 0.78
CAPN1-203ENST00000525013 HPSEQ9Y251 543 aa19.93■□□□□ 0.78
CAPN1-203ENST00000525013 ZNF638Q14966 1978 aaKnown RBP19.93■□□□□ 0.78
CAPN1-203ENST00000525013 EXOC3O60645 756 aa19.92■□□□□ 0.78
CAPN1-203ENST00000525013 FGF19O95750 216 aa19.92■□□□□ 0.78
CAPN1-203ENST00000525013 HAPLN1P10915 354 aaPredicted RBP19.92■□□□□ 0.78
CAPN1-203ENST00000525013 STK4Q13043 487 aa19.92■□□□□ 0.78
CAPN1-203ENST00000525013 STXBP5Q5T5C0 1151 aa19.92■□□□□ 0.78
CAPN1-203ENST00000525013 GAREM2Q75VX8 874 aa19.92■□□□□ 0.78
CAPN1-203ENST00000525013 TRAPPC11Q7Z392 1133 aa19.92■□□□□ 0.78
CAPN1-203ENST00000525013 OSTM1Q86WC4 334 aa19.92■□□□□ 0.78
CAPN1-203ENST00000525013 GPIHBP1Q8IV16 184 aa19.92■□□□□ 0.78
CAPN1-203ENST00000525013 GOLGA5Q8TBA6 731 aa19.92■□□□□ 0.78
CAPN1-203ENST00000525013 ACBD6Q9BR61 282 aa19.92■□□□□ 0.78
CAPN1-203ENST00000525013 PI4K2AQ9BTU6 479 aa19.92■□□□□ 0.78
CAPN1-203ENST00000525013 COL4A3Q01955 1670 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 KANSL1LA0AUZ9 987 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 PRPF40AO75400 957 aaKnown RBP19.91■□□□□ 0.78
CAPN1-203ENST00000525013 PSMC3P17980 439 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 CD72P21854 359 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 PCSK1P29120 753 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 GDI1P31150 447 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 LHX1P48742 406 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 NDUFA8P51970 172 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 PSMD2Q13200 908 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 UBXN2BQ14CS0 331 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 PSMD6Q15008 389 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 ANGPT1Q15389 498 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 SOWAHAQ2M3V2 549 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 ARHGAP15Q53QZ3 475 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 INTS6LQ5JSJ4 861 aaKnown RBP19.91■□□□□ 0.78
CAPN1-203ENST00000525013 GPR158Q5T848 1215 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 VITQ6UXI7 678 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 TPRG1Q6ZUI0 275 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 FSIP1Q8NA03 581 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 KIAA0895Q8NCT3 520 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 PJA1Q8NG27 643 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 GCNAQ96QF7 691 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 MMS19Q96T76 1030 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 CGRRF1Q99675 332 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 GTF3C4Q9UKN8 822 aa19.91■□□□□ 0.78
CAPN1-203ENST00000525013 RIF1Q5UIP0 2472 aaKnown RBP19.91■□□□□ 0.78
CAPN1-203ENST00000525013 DENND4CQ5VZ89 1909 aa19.9■□□□□ 0.78
CAPN1-203ENST00000525013 TICRRQ7Z2Z1 1910 aa19.9■□□□□ 0.78
CAPN1-203ENST00000525013 PTPRZ1P23471 2315 aaPredicted RBP19.9■□□□□ 0.78
CAPN1-203ENST00000525013 HEPACAM2A8MVW5 462 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms