RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 EIF3DO15371 548 aaKnown RBP eCLIP9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 MOSPD3O75425 235 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 VNN2O95498 520 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 ITGB3P05106 788 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 KRT19P08727 400 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 GJA1P17302 382 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 TARSP26639 723 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 GABRR2P28476 465 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 PCSK1P29120 753 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 VIPR2P41587 438 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 CASP5P51878 434 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 KPNA1P52294 538 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 PLCB2Q00722 1185 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 CSTF1Q05048 431 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 KCNA1Q09470 495 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 LRRC32Q14392 662 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 GPR158Q5T848 1215 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 CRELD2Q6UXH1 353 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 VITQ6UXI7 678 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 MAMSTRQ6ZN01 415 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 HS2ST1Q7LGA3 356 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 GPD1LQ8N335 351 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 ATRIPQ8WXE1 791 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 FAM3CQ92520 227 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 NELL1Q92832 810 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 SECISBP2LQ93073 1101 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 CLDN23Q96B33 292 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 ZSWIM3Q96MP5 696 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 CBWD1Q9BRT8 395 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 FAM126AQ9BYI3 521 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 PLA2G2FQ9BZM2 168 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 CRISPLD1Q9H336 500 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 C8orf33Q9H7E9 229 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 KIAA1586Q9HCI6 787 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 ZNF334Q9HCZ1 680 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 ABCB6Q9NP58 842 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 THG1LQ9NWX6 298 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 OBP2AQ9NY56 170 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 NDRG2Q9UN36 371 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 AGAP1Q9UPQ3 857 aa9.54□□□□□ -0.88
CTNNA1-240ENST00000523912 WDR87Q6ZQQ6 2873 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 PDCD11Q14690 1871 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 A0A087X0B3 334 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 MED19A0JLT2 244 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 GOLGA8IPA6NC78 632 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 GOLGA8JA6NMD2 632 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 PRR5-ARHGAP8B1AHC4 643 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 CHADO15335 359 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 LRRN2O75325 713 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 SOAT2O75908 522 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 PRPF6O94906 941 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 HAPLN1P10915 354 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 CD72P21854 359 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 DDX6P26196 483 aaKnown RBP eCLIP9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 WEE1P30291 646 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 AVPR1AP37288 418 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 ME1P48163 572 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 LHX1P48742 406 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 MLLT6P55198 1093 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 SNRPFP62306 86 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 RPL10AP62906 217 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 ARHGAP8P85298 464 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 FCHO2Q0JRZ9 810 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 DUOXA2Q1HG44 320 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 ARHGAP29Q52LW3 1261 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 FAM26FQ5R3K3 315 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 ATL3Q6DD88 541 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 ADGRF2Q8IZF7 708 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 MAML2Q8IZL2 1156 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 PDCL2Q8N4E4 241 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 CSGALNACT2Q8N6G5 542 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 TTC9BQ8N6N2 239 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 TOP6BLQ8N6T0 577 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 C1orf127Q8N9H9 656 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 ZBTB44Q8NCP5 570 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 LEO1Q8WVC0 666 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 TMEM209Q96SK2 561 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 LPIN3Q9BQK8 851 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 ACBD6Q9BR61 282 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 LRRC3Q9BY71 257 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 TRIM9Q9C026 710 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 MTMR12Q9C0I1 747 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 IKZF4Q9H2S9 585 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 PCIF1Q9H4Z3 704 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 TASP1Q9H6P5 420 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 KBTBD4Q9NVX7 518 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 ZSCAN32Q9NX65 697 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 UXTQ9UBK9 157 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 CFAP45Q9UL16 551 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 MTF2Q9Y483 593 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 SNX9Q9Y5X1 595 aa9.53□□□□□ -0.88
CTNNA1-240ENST00000523912 MYH15Q9Y2K3 1946 aa9.52□□□□□ -0.88
CTNNA1-240ENST00000523912 SOBPA7XYQ1 873 aa9.52□□□□□ -0.89
CTNNA1-240ENST00000523912 LILRB5O75023 590 aa9.52□□□□□ -0.89
CTNNA1-240ENST00000523912 PRPF40AO75400 957 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-240ENST00000523912 F13A1P00488 732 aa9.52□□□□□ -0.89
CTNNA1-240ENST00000523912 CSH1P0DML2 217 aa9.52□□□□□ -0.89
CTNNA1-240ENST00000523912 CSH2P0DML3 217 aa9.52□□□□□ -0.89
CTNNA1-240ENST00000523912 ZSCAN22P10073 491 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-240ENST00000523912 DMDP11532 3685 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms