RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 PRDM10Q9NQV6 1147 aa7.15□□□□□ -1.26
PVT1-217ENST00000523190 TMEM161AQ9NX61 479 aa7.15□□□□□ -1.26
PVT1-217ENST00000523190 GDAP2Q9NXN4 497 aa7.15□□□□□ -1.26
PVT1-217ENST00000523190 MYO1AQ9UBC5 1043 aa7.15□□□□□ -1.26
PVT1-217ENST00000523190 LRFN2Q9ULH4 789 aa7.15□□□□□ -1.26
PVT1-217ENST00000523190 L1RE1Q9UN81 338 aa7.15□□□□□ -1.26
PVT1-217ENST00000523190 PCDHB7Q9Y5E2 793 aa7.15□□□□□ -1.26
PVT1-217ENST00000523190 A0A0A6YYK5 440 aaPredicted RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 GRID2IPA4D2P6 1211 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 TRIM43BA6NCK2 446 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 A8MXQ7 604 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 TDRD15B5MCY1 1934 aaKnown RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 F8W810 466 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 I3L4J1 428 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 M0QYV0 167 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 O00370 1275 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 MED7O43513 233 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 HUS1O60921 280 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 PALMO75781 387 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 URI1O94763 535 aaPredicted RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 MICAL2O94851 1124 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 KIF4AO95239 1232 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 PDGFRBP09619 1106 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 EN2P19622 333 aaPredicted RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 WARSP23381 471 aaKnown RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 ITGB8P26012 769 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 RPL9P32969 192 aaKnown RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 NSFP46459 744 aaKnown RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 BRCC3P46736 316 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 GPC5P78333 572 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 CENPCQ03188 943 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 UPP1Q16831 310 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 GOLGA7BQ2TAP0 167 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 TIGD5Q53EQ6 642 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 C2CD6Q53TS8 623 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 SGO2Q562F6 1265 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 WSCD1Q658N2 575 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 LLGL2Q6P1M3 1020 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 CNKSR3Q6P9H4 555 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 DSTYKQ6XUX3 929 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.14□□□□□ -1.27
PVT1-217ENST00000523190 MON1BQ7L1V2 547 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 LIMS2Q7Z4I7 341 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 PHLDB2Q86SQ0 1253 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 ACOT1Q86TX2 421 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 UNC93AQ86WB7 457 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 ZNF280BQ86YH2 543 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 MCOLN2Q8IZK6 566 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 PDCL2Q8N4E4 241 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 RNF10Q8N5U6 811 aaKnown RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 TOP6BLQ8N6T0 577 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 TRIM58Q8NG06 486 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 SLC35G2Q8TBE7 412 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 TRIM43Q96BQ3 446 aaPredicted RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 VWCEQ96DN2 955 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 HEXIM2Q96MH2 286 aaKnown RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 UROC1Q96N76 676 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 CASD1Q96PB1 797 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 ALS2CR12Q96Q35 445 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 NAPGQ99747 312 aaPredicted RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 LPIN3Q9BQK8 851 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 C11orf70Q9BRQ4 267 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 SNX25Q9H3E2 840 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 GOLPH3Q9H4A6 298 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 FAM124BQ9H5Z6 455 aaPredicted RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 OSGEPQ9NPF4 335 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 FAM49BQ9NUQ9 324 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 TBC1D13Q9NVG8 400 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 CTTNBP2NLQ9P2B4 639 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 HCSTQ9UBK5 93 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 CNOT8Q9UFF9 292 aaKnown RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 CHORDC1Q9UHD1 332 aaPredicted RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 GTF3C4Q9UKN8 822 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 PCDHGC3Q9UN70 934 aa7.14□□□□□ -1.27
PVT1-217ENST00000523190 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.14□□□□□ -1.27
PVT1-217ENST00000523190 TIMM13Q9Y5L4 95 aaPredicted RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.14□□□□□ -1.27
PVT1-217ENST00000523190 TSC2P49815 1807 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 CTAGE9A4FU28 777 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 TBKBP1A7MCY6 615 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 ENC1O14682 589 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 KIAA0355O15063 1070 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 NCK2O43639 380 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 B3GAT3O94766 335 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 UPP2O95045 317 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 FTCDO95954 541 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 TIMP1P01033 207 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 ATP1A1P05023 1023 aaKnown RBP7.13□□□□□ -1.27
PVT1-217ENST00000523190 CYP1A2P05177 515 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 ITGB1P05556 798 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 ODC1P11926 461 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 CCDC130P13994 396 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 CSF2RAP15509 400 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 RAG1P15918 1043 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 RRM1P23921 792 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 ACAT1P24752 427 aaKnown RBP7.13□□□□□ -1.27
PVT1-217ENST00000523190 LMO2P25791 158 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 ADORA2BP29275 332 aa7.13□□□□□ -1.27
PVT1-217ENST00000523190 CDH5P33151 784 aaPredicted RBP7.13□□□□□ -1.27
PVT1-217ENST00000523190 RFC2P35250 354 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms