RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 VPS52Q8N1B4 723 aa27.36■■□□□ 1.97
NKX2-1-204ENST00000522719 CRYBG2Q8N1P7 616 aa27.36■■□□□ 1.97
NKX2-1-204ENST00000522719 PIK3R5Q8WYR1 880 aa27.36■■□□□ 1.97
NKX2-1-204ENST00000522719 TMEM176AQ96HP8 235 aa27.36■■□□□ 1.97
NKX2-1-204ENST00000522719 HMGXB4Q9UGU5 601 aa27.36■■□□□ 1.97
NKX2-1-204ENST00000522719 SSX2IPQ9Y2D8 614 aa27.36■■□□□ 1.97
NKX2-1-204ENST00000522719 CYP26A1O43174 497 aa27.35■■□□□ 1.97
NKX2-1-204ENST00000522719 PNMA6AP0CW24 399 aaPredicted RBP27.35■■□□□ 1.97
NKX2-1-204ENST00000522719 LMO2P25791 158 aa27.35■■□□□ 1.97
NKX2-1-204ENST00000522719 CLCN1P35523 988 aa27.35■■□□□ 1.97
NKX2-1-204ENST00000522719 PTK2Q05397 1052 aa27.35■■□□□ 1.97
NKX2-1-204ENST00000522719 SLC4A11Q8NBS3 891 aa27.35■■□□□ 1.97
NKX2-1-204ENST00000522719 FBXO22Q8NEZ5 403 aa27.35■■□□□ 1.97
NKX2-1-204ENST00000522719 TIFAQ96CG3 184 aa27.35■■□□□ 1.97
NKX2-1-204ENST00000522719 TWNKQ96RR1 684 aa27.35■■□□□ 1.97
NKX2-1-204ENST00000522719 ELOVL4Q9GZR5 314 aa27.35■■□□□ 1.97
NKX2-1-204ENST00000522719 CDH9Q9ULB4 789 aa27.35■■□□□ 1.97
NKX2-1-204ENST00000522719 KIAA1257Q9ULG3 409 aa27.35■■□□□ 1.97
NKX2-1-204ENST00000522719 NME7Q9Y5B8 376 aa27.35■■□□□ 1.97
NKX2-1-204ENST00000522719 URODP06132 367 aa27.34■■□□□ 1.97
NKX2-1-204ENST00000522719 PDGFRBP09619 1106 aa27.34■■□□□ 1.97
NKX2-1-204ENST00000522719 ASIC2Q16515 512 aa27.34■■□□□ 1.97
NKX2-1-204ENST00000522719 ZNF394Q53GI3 561 aa27.34■■□□□ 1.97
NKX2-1-204ENST00000522719 PRPF38BQ5VTL8 546 aaKnown RBP27.34■■□□□ 1.97
NKX2-1-204ENST00000522719 KIAA0319Q5VV43 1072 aa27.34■■□□□ 1.97
NKX2-1-204ENST00000522719 SPPL3Q8TCT6 385 aa27.34■■□□□ 1.97
NKX2-1-204ENST00000522719 B3GALT6Q96L58 329 aa27.34■■□□□ 1.97
NKX2-1-204ENST00000522719 PANX2Q96RD6 677 aa27.34■■□□□ 1.97
NKX2-1-204ENST00000522719 RTP3Q9BQQ7 232 aa27.34■■□□□ 1.97
NKX2-1-204ENST00000522719 ZBP1Q9H171 429 aa27.34■■□□□ 1.97
NKX2-1-204ENST00000522719 ZNHIT6Q9NWK9 470 aaKnown RBP27.34■■□□□ 1.97
NKX2-1-204ENST00000522719 MTUS1Q9ULD2 1270 aa27.34■■□□□ 1.97
NKX2-1-204ENST00000522719 COLQQ9Y215 455 aaPredicted RBP27.34■■□□□ 1.97
NKX2-1-204ENST00000522719 RANBP2P49792 3224 aaKnown RBP27.34■■□□□ 1.97
NKX2-1-204ENST00000522719 OR6C75A6NL08 312 aa27.33■■□□□ 1.97
NKX2-1-204ENST00000522719 CTSAP10619 480 aa27.33■■□□□ 1.97
NKX2-1-204ENST00000522719 BMS1Q14692 1282 aaKnown RBP27.33■■□□□ 1.97
NKX2-1-204ENST00000522719 CTXN3Q4LDR2 81 aa27.33■■□□□ 1.97
NKX2-1-204ENST00000522719 IRF2BP2Q7Z5L9 587 aa27.33■■□□□ 1.97
NKX2-1-204ENST00000522719 SPRED2Q7Z698 418 aa27.33■■□□□ 1.97
NKX2-1-204ENST00000522719 LNX1Q8TBB1 728 aaPredicted RBP27.33■■□□□ 1.97
NKX2-1-204ENST00000522719 RIN2Q8WYP3 895 aaPredicted RBP27.33■■□□□ 1.97
NKX2-1-204ENST00000522719 ALG13Q9NP73 1137 aaKnown RBP27.33■■□□□ 1.97
NKX2-1-204ENST00000522719 BACE2Q9Y5Z0 518 aa27.33■■□□□ 1.97
NKX2-1-204ENST00000522719 BZW2Q9Y6E2 419 aaKnown RBP27.33■■□□□ 1.97
NKX2-1-204ENST00000522719 H3BNC9 293 aa27.33■■□□□ 1.96
NKX2-1-204ENST00000522719 TBC1D4O60343 1298 aa27.33■■□□□ 1.96
NKX2-1-204ENST00000522719 PRKCIP41743 596 aa27.33■■□□□ 1.96
NKX2-1-204ENST00000522719 TSPY1Q01534 308 aa27.33■■□□□ 1.96
NKX2-1-204ENST00000522719 GOLGA8FQ08AF8 430 aa27.33■■□□□ 1.96
NKX2-1-204ENST00000522719 GOLGA8DPQ0D2H9 430 aa27.33■■□□□ 1.96
NKX2-1-204ENST00000522719 CCDC186Q7Z3E2 898 aa27.33■■□□□ 1.96
NKX2-1-204ENST00000522719 ACOT1Q86TX2 421 aa27.33■■□□□ 1.96
NKX2-1-204ENST00000522719 PPP1R9BQ96SB3 815 aa27.33■■□□□ 1.96
NKX2-1-204ENST00000522719 SYT15Q9BQS2 421 aa27.33■■□□□ 1.96
NKX2-1-204ENST00000522719 MRPL17Q9NRX2 175 aaKnown RBP27.33■■□□□ 1.96
NKX2-1-204ENST00000522719 MTRRQ9UBK8 725 aa27.33■■□□□ 1.96
NKX2-1-204ENST00000522719 PTPN1P18031 435 aaKnown RBP27.32■■□□□ 1.96
NKX2-1-204ENST00000522719 CREMQ03060 361 aa27.32■■□□□ 1.96
NKX2-1-204ENST00000522719 ARID5AQ03989 594 aa27.32■■□□□ 1.96
NKX2-1-204ENST00000522719 PSMD5Q16401 504 aa27.32■■□□□ 1.96
NKX2-1-204ENST00000522719 INTS6LQ5JSJ4 861 aaKnown RBP27.32■■□□□ 1.96
NKX2-1-204ENST00000522719 E4F1Q66K89 784 aaPredicted RBP27.32■■□□□ 1.96
NKX2-1-204ENST00000522719 B3GALNT2Q8NCR0 500 aa27.32■■□□□ 1.96
NKX2-1-204ENST00000522719 POF1BQ8WVV4 589 aa27.32■■□□□ 1.96
NKX2-1-204ENST00000522719 HEXIM2Q96MH2 286 aaKnown RBP27.32■■□□□ 1.96
NKX2-1-204ENST00000522719 DPEP3Q9H4B8 488 aa27.32■■□□□ 1.96
NKX2-1-204ENST00000522719 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.32■■□□□ 1.96
NKX2-1-204ENST00000522719 HCRTO43612 131 aa27.31■■□□□ 1.96
NKX2-1-204ENST00000522719 SERPING1P05155 500 aa27.31■■□□□ 1.96
NKX2-1-204ENST00000522719 VDRP11473 427 aa27.31■■□□□ 1.96
NKX2-1-204ENST00000522719 CYP11B1P15538 503 aa27.31■■□□□ 1.96
NKX2-1-204ENST00000522719 ACAT1P24752 427 aaKnown RBP27.31■■□□□ 1.96
NKX2-1-204ENST00000522719 GNA15P30679 374 aa27.31■■□□□ 1.96
NKX2-1-204ENST00000522719 PDE6CP51160 858 aa27.31■■□□□ 1.96
NKX2-1-204ENST00000522719 GPM6BQ13491 265 aa27.31■■□□□ 1.96
NKX2-1-204ENST00000522719 MAPRE1Q15691 268 aaKnown RBP27.31■■□□□ 1.96
NKX2-1-204ENST00000522719 MEA1Q16626 185 aa27.31■■□□□ 1.96
NKX2-1-204ENST00000522719 SLC47A2Q86VL8 602 aa27.31■■□□□ 1.96
NKX2-1-204ENST00000522719 OR10T2Q8NGX3 314 aa27.31■■□□□ 1.96
NKX2-1-204ENST00000522719 TLR9Q9NR96 1032 aa27.31■■□□□ 1.96
NKX2-1-204ENST00000522719 LAMA2P24043 3122 aaKnown RBP27.3■■□□□ 1.96
NKX2-1-204ENST00000522719 CDK17Q00537 523 aa27.3■■□□□ 1.96
NKX2-1-204ENST00000522719 KLHL30Q0D2K2 578 aa27.3■■□□□ 1.96
NKX2-1-204ENST00000522719 ORC1Q13415 861 aa27.3■■□□□ 1.96
NKX2-1-204ENST00000522719 SGO2Q562F6 1265 aa27.3■■□□□ 1.96
NKX2-1-204ENST00000522719 PRSS55Q6UWB4 352 aaPredicted RBP27.3■■□□□ 1.96
NKX2-1-204ENST00000522719 TMC7Q7Z402 723 aa27.3■■□□□ 1.96
NKX2-1-204ENST00000522719 ZNF677Q86XU0 584 aa27.3■■□□□ 1.96
NKX2-1-204ENST00000522719 DCP1BQ8IZD4 617 aaKnown RBP27.3■■□□□ 1.96
NKX2-1-204ENST00000522719 EPS8L1Q8TE68 723 aa27.3■■□□□ 1.96
NKX2-1-204ENST00000522719 ZCWPW1Q9H0M4 648 aa27.3■■□□□ 1.96
NKX2-1-204ENST00000522719 IRAK3Q9Y616 596 aa27.3■■□□□ 1.96
NKX2-1-204ENST00000522719 MYH10P35580 1976 aa27.29■■□□□ 1.96
NKX2-1-204ENST00000522719 MYO9BQ13459 2157 aa27.29■■□□□ 1.96
NKX2-1-204ENST00000522719 LILRB3O75022 631 aa27.29■■□□□ 1.96
NKX2-1-204ENST00000522719 CD19P15391 556 aa27.29■■□□□ 1.96
NKX2-1-204ENST00000522719 STILQ15468 1287 aa27.29■■□□□ 1.96
NKX2-1-204ENST00000522719 PTPN14Q15678 1187 aa27.29■■□□□ 1.96
NKX2-1-204ENST00000522719 PDE12Q6L8Q7 609 aaKnown RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms