RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 C4orf19Q8IY42 314 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 IPMKQ8NFU5 416 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 VTA1Q9NP79 307 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 FBXL5Q9UKA1 691 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 ARP10275 920 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 EPHB3P54753 998 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 GSPT2Q8IYD1 628 aaKnown RBP16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 RBM15Q96T37 977 aaKnown RBP eCLIP16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 YIPF2Q9BWQ6 316 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 DCTN4Q9UJW0 460 aa16.98■□□□□ 0.31
PCDHA3-201ENST00000522353 A0A1W2PQJ5 194 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 ALDH2P05091 517 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 POLBP06746 335 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 COBLL1Q53SF7 1204 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 FKBP1CQ5VVH2 108 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 ANKMY2Q8IV38 441 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 FRMD8Q9BZ67 464 aaPredicted RBP16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 STN1Q9H668 368 aaKnown RBP16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 RUBCNLQ9H714 662 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 ANLNQ9NQW6 1124 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 METTL5Q9NRN9 209 aaKnown RBP16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 ADA2Q9NZK5 511 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 USP32Q8NFA0 1604 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 PLSCR1O15162 318 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 STX7O15400 261 aaKnown RBP16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 CST8O60676 142 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 EEF1DP29692 281 aaKnown RBP16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 ETFBP38117 255 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 INHBEP58166 350 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 PPATQ06203 517 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 C1orf146Q5VVC0 180 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 LINC00523Q86TU6 105 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 ATP8B4Q8TF62 1192 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 NEUROG2Q9H2A3 272 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 DIP2BQ9P265 1576 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 STX18Q9P2W9 335 aaKnown RBP16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 SPDYE5A6NIY4 337 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 NPTX2P47972 431 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 SPDYE7PQ495Y7 208 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 PPP4R4Q6NUP7 873 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 SYN2Q92777 582 aaPredicted RBP16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 RUSC1Q9BVN2 902 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 WWP1Q9H0M0 922 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 CRLS1Q9UJA2 301 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 M0QYT0 321 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 GLIS2Q9BZE0 524 aaPredicted RBP16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 PSD3Q9NYI0 1048 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 SELENONQ9NZV5 590 aa16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 XPO7Q9UIA9 1087 aaKnown RBP16.97■□□□□ 0.31
PCDHA3-201ENST00000522353 WNT10BO00744 389 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 AVPR1AP37288 418 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 PKN3Q6P5Z2 889 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 COG1Q8WTW3 980 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 ELMO2Q96JJ3 720 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 GTF3C4Q9UKN8 822 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 VTNP04004 478 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 PATL1Q86TB9 770 aaKnown RBP16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 FAM129AQ9BZQ8 928 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 ING2Q9H160 280 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 HMX1Q9NP08 348 aaPredicted RBP16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 PKD2L2Q9NZM6 624 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 SMG5Q9UPR3 1016 aaKnown RBP16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 FRMD3A2A2Y4 597 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 RSPH10B2B2RC85 870 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 NFIBO00712 420 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 FBXO21O94952 628 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 ASS1P00966 412 aaKnown RBP16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 RSPH10BP0C881 870 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 PTGER2P43116 358 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 TTLL9Q3SXZ7 439 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 Q4G0T1 1027 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 ITIH5Q86UX2 942 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 ADGRF2Q8IZF7 708 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 SLC25A41Q8N5S1 370 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 CHP1Q99653 195 aa16.96■□□□□ 0.31
PCDHA3-201ENST00000522353 RNF103-CHMP3A0A140T963 221 aa16.96■□□□□ 0.3
PCDHA3-201ENST00000522353 CDH16O75309 829 aa16.96■□□□□ 0.3
PCDHA3-201ENST00000522353 AGPAT5Q9NUQ2 364 aa16.96■□□□□ 0.3
PCDHA3-201ENST00000522353 HPS5Q9UPZ3 1129 aa16.96■□□□□ 0.3
PCDHA3-201ENST00000522353 BCAT1P54687 386 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 SPDYAQ5MJ70 313 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 TRIM48Q8IWZ4 208 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 C1orf131Q8NDD1 294 aaKnown RBP16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 CEP19Q96LK0 163 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 SMYD3Q9H7B4 428 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 MLXIPLQ9NP71 852 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 MRGBPQ9NV56 204 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 NEU2Q9Y3R4 380 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 FKBP1AP62942 108 aaKnown RBP16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 TERF2Q15554 542 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 MIB1Q86YT6 1006 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 HS6ST3Q8IZP7 471 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 GPRC5CQ9NQ84 441 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 XPNPEP3Q9NQH7 507 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 C20orf96Q9NUD7 363 aaPredicted RBP16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 KIF17Q9P2E2 1029 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 ZC3H13Q5T200 1668 aaKnown RBP16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 MEGF6O75095 1541 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 OCM2P0CE71 109 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 OCMP0CE72 109 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms