RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 SMAD3P84022 425 aaKnown RBP23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 BIRC3Q13489 604 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 SLC30A5Q8TAD4 765 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 MTUS1Q9ULD2 1270 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 KIAA1671Q9BY89 1806 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 CDH23Q9H251 3354 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 TARSL2A2RTX5 802 aaKnown RBP23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 NRP1O14786 923 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 PPEF2O14830 753 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 ERLIN1O75477 346 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 ITGB3P05106 788 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 KRT19P08727 400 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 LINC00271P0C7V0 271 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 LAG3P18627 525 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 IGFBP6P24592 240 aaPredicted RBP23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 GTF2H1P32780 548 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 NAP1L1P55209 391 aaKnown RBP23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 LRIT3Q3SXY7 679 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 KCNT2Q6UVM3 1135 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 SV2AQ7L0J3 742 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 COLGALT1Q8NBJ5 622 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 OLIG1Q8TAK6 271 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 CLP1Q92989 425 aaKnown RBP23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 ZNF558Q96NG5 402 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 TMEM175Q9BSA9 504 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 SYT11Q9BT88 431 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 FAN1Q9Y2M0 1017 aa23.56■■□□□ 1.36
PTP4A3-204ENST00000521578 DDX3XO00571 662 aaKnown RBP eCLIP23.55■■□□□ 1.362e-14■■■□□ 19
PTP4A3-204ENST00000521578 PODXLO00592 558 aa23.55■■□□□ 1.36
PTP4A3-204ENST00000521578 PALMO75781 387 aa23.55■■□□□ 1.36
PTP4A3-204ENST00000521578 C4BPAP04003 597 aaKnown RBP23.55■■□□□ 1.36
PTP4A3-204ENST00000521578 LRPAP1P30533 357 aa23.55■■□□□ 1.36
PTP4A3-204ENST00000521578 TAP1Q03518 808 aa23.55■■□□□ 1.36
PTP4A3-204ENST00000521578 UPP1Q16831 310 aa23.55■■□□□ 1.36
PTP4A3-204ENST00000521578 EPC2Q52LR7 807 aa23.55■■□□□ 1.36
PTP4A3-204ENST00000521578 TDRD10Q5VZ19 366 aaKnown RBP23.55■■□□□ 1.36
PTP4A3-204ENST00000521578 PHLDB3Q6NSJ2 640 aa23.55■■□□□ 1.36
PTP4A3-204ENST00000521578 COG1Q8WTW3 980 aa23.55■■□□□ 1.36
PTP4A3-204ENST00000521578 UROC1Q96N76 676 aa23.55■■□□□ 1.36
PTP4A3-204ENST00000521578 C17orf80Q9BSJ5 609 aa23.55■■□□□ 1.36
PTP4A3-204ENST00000521578 PHACTR2O75167 634 aa23.54■■□□□ 1.36
PTP4A3-204ENST00000521578 POLR2BP30876 1174 aaKnown RBP23.54■■□□□ 1.36
PTP4A3-204ENST00000521578 RPL9P32969 192 aaKnown RBP23.54■■□□□ 1.36
PTP4A3-204ENST00000521578 AP3M2P53677 418 aa23.54■■□□□ 1.36
PTP4A3-204ENST00000521578 LONRF2Q1L5Z9 754 aa23.54■■□□□ 1.36
PTP4A3-204ENST00000521578 C9orf57Q5W0N0 161 aa23.54■■□□□ 1.36
PTP4A3-204ENST00000521578 MMGT1Q8N4V1 131 aa23.54■■□□□ 1.36
PTP4A3-204ENST00000521578 HASPINQ8TF76 798 aa23.54■■□□□ 1.36
PTP4A3-204ENST00000521578 AAASQ9NRG9 546 aa23.54■■□□□ 1.36
PTP4A3-204ENST00000521578 RNF14Q9UBS8 474 aa23.54■■□□□ 1.36
PTP4A3-204ENST00000521578 SIX4Q9UIU6 781 aa23.54■■□□□ 1.36
PTP4A3-204ENST00000521578 ITGA11Q9UKX5 1188 aa23.54■■□□□ 1.36
PTP4A3-204ENST00000521578 AGAP1Q9UPQ3 857 aa23.54■■□□□ 1.36
PTP4A3-204ENST00000521578 B3GAT3O94766 335 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 MCM3P25205 808 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 IFI16Q16666 785 aaKnown RBP23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 ZACNQ401N2 412 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 BEND6Q5SZJ8 279 aaPredicted RBP23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 MEI1Q5TIA1 1274 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 PPP2R2DQ66LE6 453 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 TMEM173Q86WV6 379 aaPredicted RBP23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 C3orf58Q8NDZ4 430 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 DDX27Q96GQ7 796 aaKnown RBP23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 FUT8Q9BYC5 575 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 SLC28A3Q9HAS3 691 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 TMEM8AQ9HCN3 771 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 PCDHB12Q9Y5F1 795 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 NLRC5Q86WI3 1866 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 A0A0A6YYK5 440 aaPredicted RBP23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 NCK2O43639 380 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 KIF4AO95239 1232 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 CST3P01034 146 aaPredicted RBP23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 ITGB1P05556 798 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 CTNNB1P35222 781 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 MXI1P50539 228 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 VSNL1P62760 191 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 KRT39Q6A163 491 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 CXorf38Q8TB03 319 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 TIFAQ96CG3 184 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 CERS4Q9HA82 394 aa23.53■■□□□ 1.36
PTP4A3-204ENST00000521578 SCN1AP35498 2009 aa23.52■■□□□ 1.36
PTP4A3-204ENST00000521578 GRID2IPA4D2P6 1211 aa23.52■■□□□ 1.36
PTP4A3-204ENST00000521578 PIRO00625 290 aa23.52■■□□□ 1.36
PTP4A3-204ENST00000521578 SASH3O75995 380 aa23.52■■□□□ 1.36
PTP4A3-204ENST00000521578 H2AFZP0C0S5 128 aa23.52■■□□□ 1.36
PTP4A3-204ENST00000521578 BMPR1AP36894 532 aa23.52■■□□□ 1.36
PTP4A3-204ENST00000521578 PLA2G4AP47712 749 aa23.52■■□□□ 1.36
PTP4A3-204ENST00000521578 RBP5P82980 135 aa23.52■■□□□ 1.36
PTP4A3-204ENST00000521578 DCLRE1AQ6PJP8 1040 aa23.52■■□□□ 1.36
PTP4A3-204ENST00000521578 C15orf39Q6ZRI6 1047 aa23.52■■□□□ 1.36
PTP4A3-204ENST00000521578 H2AFVQ71UI9 128 aa23.52■■□□□ 1.36
PTP4A3-204ENST00000521578 BCL7CQ8WUZ0 217 aaPredicted RBP23.52■■□□□ 1.36
PTP4A3-204ENST00000521578 TGS1Q96RS0 853 aaKnown RBP23.52■■□□□ 1.36
PTP4A3-204ENST00000521578 COLEC11Q9BWP8 271 aa23.52■■□□□ 1.36
PTP4A3-204ENST00000521578 MARCH5Q9NX47 278 aa23.52■■□□□ 1.36
PTP4A3-204ENST00000521578 VNN1O95497 513 aa23.51■■□□□ 1.35
PTP4A3-204ENST00000521578 TRPC3Q13507 836 aa23.51■■□□□ 1.35
PTP4A3-204ENST00000521578 GLIPR1L2Q4G1C9 344 aa23.51■■□□□ 1.35
PTP4A3-204ENST00000521578 LNX1Q8TBB1 728 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms