RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 GNAT2P19087 354 aa8.7□□□□□ -1.02
LSM1-202ENST00000520286 FDXRP22570 491 aa8.7□□□□□ -1.02
LSM1-202ENST00000520286 ACVR2AP27037 513 aa8.7□□□□□ -1.02
LSM1-202ENST00000520286 WNT3P56703 355 aa8.7□□□□□ -1.02
LSM1-202ENST00000520286 LINC00310P59036 64 aa8.7□□□□□ -1.02
LSM1-202ENST00000520286 CSRP2Q16527 193 aa8.7□□□□□ -1.02
LSM1-202ENST00000520286 MFSD5Q6N075 450 aa8.7□□□□□ -1.02
LSM1-202ENST00000520286 BORAQ6PGQ7 559 aa8.7□□□□□ -1.02
LSM1-202ENST00000520286 KRT28Q7Z3Y7 464 aa8.7□□□□□ -1.02
LSM1-202ENST00000520286 PPP1R32Q7Z5V6 425 aa8.7□□□□□ -1.02
LSM1-202ENST00000520286 PPP1R9BQ96SB3 815 aa8.7□□□□□ -1.02
LSM1-202ENST00000520286 HEYLQ9NQ87 328 aaPredicted RBP8.7□□□□□ -1.02
LSM1-202ENST00000520286 MRPS18AQ9NVS2 196 aaKnown RBP8.7□□□□□ -1.02
LSM1-202ENST00000520286 CLCA2Q9UQC9 943 aa8.7□□□□□ -1.02
LSM1-202ENST00000520286 TBC1D30Q9Y2I9 924 aa8.7□□□□□ -1.02
LSM1-202ENST00000520286 FANCD2Q9BXW9 1451 aa8.7□□□□□ -1.02
LSM1-202ENST00000520286 CEP164Q9UPV0 1460 aa8.7□□□□□ -1.02
LSM1-202ENST00000520286 MROH2BQ7Z745 1585 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 PIP5K1BO14986 540 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 XRCC6P12956 609 aaKnown RBP eCLIP8.69□□□□□ -1.02
LSM1-202ENST00000520286 VIPR2P41587 438 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 SLURP1P55000 103 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 ARL4CP56559 192 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 TCF15Q12870 199 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 CLASRPQ8N2M8 674 aaKnown RBP8.69□□□□□ -1.02
LSM1-202ENST00000520286 GALNT15Q8N3T1 639 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 ZNF384Q8TF68 577 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 STYXQ8WUJ0 223 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 TMEM176AQ96HP8 235 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 TBATAQ96M53 351 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 LRRC37BQ96QE4 947 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 LMF1Q96S06 567 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 CPEB1Q9BZB8 566 aaKnown RBP8.69□□□□□ -1.02
LSM1-202ENST00000520286 ZSCAN32Q9NX65 697 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 POGKQ9P215 609 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 HESX1Q9UBX0 185 aa8.69□□□□□ -1.02
LSM1-202ENST00000520286 LRRFIP2Q9Y608 721 aaKnown RBP8.69□□□□□ -1.02
LSM1-202ENST00000520286 LOC102723971A0A1B0GUV8 181 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 DRGXA6NNA5 263 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 VPS4BO75351 444 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 FARP2O94887 1054 aaPredicted RBP8.68□□□□□ -1.02
LSM1-202ENST00000520286 PRSS23O95084 383 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 AGR2O95994 175 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 CYP2C9P11712 490 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 ARHGEF7Q14155 803 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 TAF5Q15542 800 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 ARHGAP15Q53QZ3 475 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 NOMO2Q5JPE7 1267 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 JMJD6Q6NYC1 403 aaPredicted RBP8.68□□□□□ -1.02
LSM1-202ENST00000520286 CYP26C1Q6V0L0 522 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 ARHGEF18Q6ZSZ5 1173 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 RFX8Q6ZV50 586 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 USP49Q70CQ1 688 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 MED25Q71SY5 747 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 PLEKHH3Q7Z736 793 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 TMEM151BQ8IW70 566 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 PHACTR3Q96KR7 559 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 MOGAT1Q96PD6 335 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 TLR10Q9BXR5 811 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 SEC61A2Q9H9S3 476 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 AS3MTQ9HBK9 375 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 TMEM8AQ9HCN3 771 aa8.68□□□□□ -1.02
LSM1-202ENST00000520286 H7C4K7 107 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 IRAK2O43187 625 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 KCNQ3O43525 872 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 CPT1AP50416 773 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 FSTL1Q12841 308 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 KCNA10Q16322 511 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 SLC4A8Q2Y0W8 1093 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 PLA1AQ53H76 456 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 ARL6IP4Q66PJ3 421 aaKnown RBP8.67□□□□□ -1.02
LSM1-202ENST00000520286 DRICH1Q6PGQ1 229 aaPredicted RBP8.67□□□□□ -1.02
LSM1-202ENST00000520286 USP17L6PQ6QN14 398 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 CRTC1Q6UUV9 634 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 GAS2L3Q86XJ1 694 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 SUGP1Q8IWZ8 645 aaKnown RBP8.67□□□□□ -1.02
LSM1-202ENST00000520286 NUP133Q8WUM0 1156 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 ST8SIA2Q92186 375 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 UBXN10Q96LJ8 280 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 PLA2G12BQ9BX93 195 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 DHX36Q9H2U1 1008 aaKnown RBP8.67□□□□□ -1.02
LSM1-202ENST00000520286 XPNPEP3Q9NQH7 507 aa8.67□□□□□ -1.02
LSM1-202ENST00000520286 CCP110O43303 1012 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 NOBOXO60393 691 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 TNFRSF6BO95407 300 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 ITGA5P08648 1049 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 SRGNP10124 158 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 CKBP12277 381 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 TPH1P17752 444 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 MGAT1P26572 445 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 RPS19P39019 145 aaKnown RBP8.66□□□□□ -1.02
LSM1-202ENST00000520286 CHN2P52757 468 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 PPP2CBP62714 309 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 PPP2CAP67775 309 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 SLFN5Q08AF3 891 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 LMOD3Q0VAK6 560 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 GRM7Q14831 915 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 INSCQ1MX18 579 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 JAKMIP3Q5VZ66 844 aa8.66□□□□□ -1.02
LSM1-202ENST00000520286 PLAG1Q6DJT9 500 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms