RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 MCF2P10911 925 aa27.22■■□□□ 1.95
COL13A1-213ENST00000520267 RAD23BP54727 409 aa27.22■■□□□ 1.95
COL13A1-213ENST00000520267 C3orf20Q8ND61 904 aa27.22■■□□□ 1.95
COL13A1-213ENST00000520267 PPTC7Q8NI37 304 aa27.22■■□□□ 1.95
COL13A1-213ENST00000520267 VTA1Q9NP79 307 aa27.22■■□□□ 1.95
COL13A1-213ENST00000520267 PDHXO00330 501 aa27.21■■□□□ 1.95
COL13A1-213ENST00000520267 MAGEB2O15479 319 aa27.21■■□□□ 1.95
COL13A1-213ENST00000520267 RGS16O15492 202 aaPredicted RBP27.21■■□□□ 1.95
COL13A1-213ENST00000520267 IFI35P80217 286 aaPredicted RBP27.21■■□□□ 1.95
COL13A1-213ENST00000520267 C6orf118Q5T5N4 469 aa27.21■■□□□ 1.95
COL13A1-213ENST00000520267 PRUNE1Q86TP1 453 aa27.21■■□□□ 1.95
COL13A1-213ENST00000520267 CXorf38Q8TB03 319 aa27.21■■□□□ 1.95
COL13A1-213ENST00000520267 ACSF2Q96CM8 615 aaPredicted RBP27.21■■□□□ 1.95
COL13A1-213ENST00000520267 SMYD3Q9H7B4 428 aa27.21■■□□□ 1.95
COL13A1-213ENST00000520267 ANAPC5Q9UJX4 755 aa27.21■■□□□ 1.95
COL13A1-213ENST00000520267 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.21■■□□□ 1.95
COL13A1-213ENST00000520267 CETN2P41208 172 aa27.21■■□□□ 1.95
COL13A1-213ENST00000520267 SLCO1A2P46721 670 aa27.21■■□□□ 1.95
COL13A1-213ENST00000520267 CCNA1P78396 465 aa27.21■■□□□ 1.95
COL13A1-213ENST00000520267 TAP1Q03518 808 aa27.21■■□□□ 1.95
COL13A1-213ENST00000520267 LRRC38Q5VT99 294 aa27.21■■□□□ 1.95
COL13A1-213ENST00000520267 IFNLR1Q8IU57 520 aaPredicted RBP27.21■■□□□ 1.95
COL13A1-213ENST00000520267 MDM1Q8TC05 714 aa27.21■■□□□ 1.95
COL13A1-213ENST00000520267 DNAJC17Q9NVM6 304 aaKnown RBP27.21■■□□□ 1.95
COL13A1-213ENST00000520267 RBM47A0AV96 593 aaKnown RBP27.2■■□□□ 1.95
COL13A1-213ENST00000520267 ITGBL1O95965 494 aaPredicted RBP27.2■■□□□ 1.95
COL13A1-213ENST00000520267 ATF7P17544 494 aaPredicted RBP27.2■■□□□ 1.95
COL13A1-213ENST00000520267 ARF4P18085 180 aaPredicted RBP27.2■■□□□ 1.95
COL13A1-213ENST00000520267 TNFAIP2Q03169 654 aa27.2■■□□□ 1.95
COL13A1-213ENST00000520267 PIGHQ14442 188 aaPredicted RBP27.2■■□□□ 1.95
COL13A1-213ENST00000520267 GTF3C2Q8WUA4 911 aaPredicted RBP27.2■■□□□ 1.95
COL13A1-213ENST00000520267 PWWP2AQ96N64 755 aa27.2■■□□□ 1.95
COL13A1-213ENST00000520267 TWNKQ96RR1 684 aa27.2■■□□□ 1.95
COL13A1-213ENST00000520267 C16orf70Q9BSU1 422 aa27.2■■□□□ 1.95
COL13A1-213ENST00000520267 TRAIPQ9BWF2 469 aa27.2■■□□□ 1.95
COL13A1-213ENST00000520267 KATNBL1Q9H079 304 aa27.2■■□□□ 1.95
COL13A1-213ENST00000520267 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.2■■□□□ 1.95
COL13A1-213ENST00000520267 HMGXB4Q9UGU5 601 aa27.2■■□□□ 1.95
COL13A1-213ENST00000520267 GOLGA8SH3BPF8 625 aa27.2■■□□□ 1.94
COL13A1-213ENST00000520267 SPOCD1Q6ZMY3 1216 aa27.2■■□□□ 1.94
COL13A1-213ENST00000520267 ZNF365Q70YC5 407 aa27.2■■□□□ 1.94
COL13A1-213ENST00000520267 RAPGEF5Q92565 580 aa27.2■■□□□ 1.94
COL13A1-213ENST00000520267 LHX5Q9H2C1 402 aa27.2■■□□□ 1.94
COL13A1-213ENST00000520267 ZNF408Q9H9D4 720 aa27.2■■□□□ 1.94
COL13A1-213ENST00000520267 FAM169AQ9Y6X4 670 aa27.2■■□□□ 1.94
COL13A1-213ENST00000520267 TRAPPC3O43617 180 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 ACSL3O95573 720 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 FAM107AO95990 144 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 PAEPP09466 180 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 CORO7P57737 925 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 MKRN3Q13064 507 aaKnown RBP27.19■■□□□ 1.94
COL13A1-213ENST00000520267 SLC10A6Q3KNW5 377 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 C10orf67Q8IYJ2 551 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 NIPA2Q8N8Q9 360 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 SLC4A11Q8NBS3 891 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 FAM107BQ9H098 131 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 GMNCA6NCL1 334 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 RASGRF2O14827 1237 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 MED7O43513 233 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 RFC1P35251 1148 aaPredicted RBP27.19■■□□□ 1.94
COL13A1-213ENST00000520267 CAV1Q03135 178 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 AUHQ13825 339 aaKnown RBP27.19■■□□□ 1.94
COL13A1-213ENST00000520267 MTHFD1LQ6UB35 978 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 JOSD2Q8TAC2 188 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 ELOVL4Q9GZR5 314 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 CNOT10Q9H9A5 744 aaKnown RBP27.19■■□□□ 1.94
COL13A1-213ENST00000520267 STRIP2Q9ULQ0 834 aa27.19■■□□□ 1.94
COL13A1-213ENST00000520267 BTBD19C9JJ37 291 aa27.18■■□□□ 1.94
COL13A1-213ENST00000520267 LIASO43766 372 aa27.18■■□□□ 1.94
COL13A1-213ENST00000520267 SNAI1O95863 264 aaPredicted RBP27.18■■□□□ 1.94
COL13A1-213ENST00000520267 KLRC2P26717 231 aa27.18■■□□□ 1.94
COL13A1-213ENST00000520267 CROCCP2Q86T23 111 aa27.18■■□□□ 1.94
COL13A1-213ENST00000520267 CCDC89Q8N998 374 aa27.18■■□□□ 1.94
COL13A1-213ENST00000520267 DNPEPQ9ULA0 475 aa27.18■■□□□ 1.94
COL13A1-213ENST00000520267 AGTP01019 485 aa27.18■■□□□ 1.94
COL13A1-213ENST00000520267 SMYD5Q6GMV2 418 aa27.18■■□□□ 1.94
COL13A1-213ENST00000520267 GSTA5Q7RTV2 222 aa27.18■■□□□ 1.94
COL13A1-213ENST00000520267 EMID1Q96A84 441 aaPredicted RBP27.18■■□□□ 1.94
COL13A1-213ENST00000520267 MS4A4AQ96JQ5 239 aa27.18■■□□□ 1.94
COL13A1-213ENST00000520267 ADAM7Q9H2U9 754 aa27.18■■□□□ 1.94
COL13A1-213ENST00000520267 TJP3O95049 919 aa27.17■■□□□ 1.94
COL13A1-213ENST00000520267 POLR2BP30876 1174 aaKnown RBP27.17■■□□□ 1.94
COL13A1-213ENST00000520267 TNFAIP8L3Q5GJ75 292 aa27.17■■□□□ 1.94
COL13A1-213ENST00000520267 IZUMO3Q5VZ72 239 aa27.17■■□□□ 1.94
COL13A1-213ENST00000520267 ILDR2Q71H61 639 aa27.17■■□□□ 1.94
COL13A1-213ENST00000520267 B4GALNT4Q76KP1 1039 aa27.17■■□□□ 1.94
COL13A1-213ENST00000520267 CPXM1Q96SM3 734 aa27.17■■□□□ 1.94
COL13A1-213ENST00000520267 ASB7Q9H672 318 aa27.17■■□□□ 1.94
COL13A1-213ENST00000520267 COL1A2P08123 1366 aa27.17■■□□□ 1.94
COL13A1-213ENST00000520267 SIGLEC16A6NMB1 481 aa27.16■■□□□ 1.94
COL13A1-213ENST00000520267 MMP13P45452 471 aa27.16■■□□□ 1.94
COL13A1-213ENST00000520267 GLIS1Q8NBF1 620 aa27.16■■□□□ 1.94
COL13A1-213ENST00000520267 NLRP7Q8WX94 980 aa27.16■■□□□ 1.94
COL13A1-213ENST00000520267 hCG_1818297A0A087WSY0 165 aa27.16■■□□□ 1.94
COL13A1-213ENST00000520267 H3BRB1 525 aa27.16■■□□□ 1.94
COL13A1-213ENST00000520267 CILPO75339 1184 aa27.16■■□□□ 1.94
COL13A1-213ENST00000520267 KRT3P12035 628 aa27.16■■□□□ 1.94
COL13A1-213ENST00000520267 PSMA2P25787 234 aa27.16■■□□□ 1.94
COL13A1-213ENST00000520267 PSMC1P62191 440 aaKnown RBP27.16■■□□□ 1.94
COL13A1-213ENST00000520267 PTPN11Q06124 597 aaPredicted RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms