RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 LY6KQ17RY6 165 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 KIZQ2M2Z5 673 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 TTMPQ5BVD1 217 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 IL31Q6EBC2 164 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 KIRREL3Q8IZU9 778 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 NDUFAF2Q8N183 169 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 OR6J1Q8NGC5 347 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 ZNF606Q8WXB4 792 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 FAM111AQ96PZ2 611 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.26□□□□□ -0.45
SYNPO-204ENST00000519664 RASSF10A6NK89 507 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 DFFAO00273 331 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 KIAA0391O15091 583 aaKnown RBP12.26□□□□□ -0.45
SYNPO-204ENST00000519664 SUPT20HL2P0C7V6 817 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 TM4SF1P30408 202 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 RABGAP1LQ5R372 815 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 PCNX4Q63HM2 1172 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 SGSM3Q96HU1 749 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 VPS39Q96JC1 886 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 SPON2Q9BUD6 331 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 TUBB6Q9BUF5 446 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 STOML1Q9UBI4 398 aa12.26□□□□□ -0.45
SYNPO-204ENST00000519664 KDM4FA0A1W2PPD8 638 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 PGM1P36871 562 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 RGS9BPQ6ZS82 235 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 SYDE1Q6ZW31 735 aaPredicted RBP12.25□□□□□ -0.45
SYNPO-204ENST00000519664 OSBPL1AQ9BXW6 950 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 CXCL8P10145 99 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 MX2P20592 715 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 ATP13A4Q4VNC1 1196 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 FASTKD1Q53R41 847 aaKnown RBP12.25□□□□□ -0.45
SYNPO-204ENST00000519664 C11orf63Q6NUN7 778 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 LLGL2Q6P1M3 1020 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 ROPN1BQ9BZX4 212 aaPredicted RBP12.25□□□□□ -0.45
SYNPO-204ENST00000519664 GANQ9H2C0 597 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 C17orf75Q9HAS0 396 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 ROPN1Q9HAT0 212 aaPredicted RBP12.25□□□□□ -0.45
SYNPO-204ENST00000519664 WDR35Q9P2L0 1181 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 MRPL42Q9Y6G3 142 aaKnown RBP12.25□□□□□ -0.45
SYNPO-204ENST00000519664 ASB14A6NK59 587 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 TRIM49D1C9J1S8 452 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 PSMD10O75832 226 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 C6orf222P0C671 652 aaPredicted RBP12.25□□□□□ -0.45
SYNPO-204ENST00000519664 ZSCAN5DPP0CG00 497 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 CYP2B6P20813 491 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 LONP2Q86WA8 852 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 CDKL3Q8IVW4 592 aaPredicted RBP12.25□□□□□ -0.45
SYNPO-204ENST00000519664 KCTD17Q8N5Z5 321 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 PDZD8Q8NEN9 1154 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 LNX1Q8TBB1 728 aaPredicted RBP12.25□□□□□ -0.45
SYNPO-204ENST00000519664 CPB2Q96IY4 423 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 PWWP2AQ96N64 755 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 PIH1D1Q9NWS0 290 aaKnown RBP12.25□□□□□ -0.45
SYNPO-204ENST00000519664 SENP1Q9P0U3 644 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 SLC12A6Q9UHW9 1150 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.25□□□□□ -0.45
SYNPO-204ENST00000519664 CFAP73A6NFT4 308 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 TGFB1I1O43294 461 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 PROSCO94903 275 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 COBLL1Q53SF7 1204 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 IRF2BP2Q7Z5L9 587 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 ARID3BQ8IVW6 561 aaPredicted RBP12.25□□□□□ -0.45
SYNPO-204ENST00000519664 MCOLN2Q8IZK6 566 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 SCFD2Q8WU76 684 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 GRAMD1AQ96CP6 724 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 DTNBP1Q96EV8 351 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 KCTD10Q9H3F6 313 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 SARS2Q9NP81 518 aaKnown RBP12.25□□□□□ -0.45
SYNPO-204ENST00000519664 ERAP1Q9NZ08 941 aa12.25□□□□□ -0.45
SYNPO-204ENST00000519664 ABT1Q9ULW3 272 aaKnown RBP12.25□□□□□ -0.45
SYNPO-204ENST00000519664 SMG5Q9UPR3 1016 aaKnown RBP12.25□□□□□ -0.45
SYNPO-204ENST00000519664 ATP5HO75947 161 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 SULT1E1P49888 294 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 LCA5Q86VQ0 697 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 EPS8L1Q8TE68 723 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 CTNNAL1Q9UBT7 734 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 FRMPD4Q14CM0 1322 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 UBR1Q8IWV7 1749 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 A0A0A6YYK5 440 aaPredicted RBP12.24□□□□□ -0.45
SYNPO-204ENST00000519664 VWA5AO00534 786 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 SOX11P35716 441 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 RFC5P40937 340 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 PLCB4Q15147 1175 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 CYB5D1Q6P9G0 228 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 BBS5Q8N3I7 341 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 ATRNO75882 1429 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 NFAT5O94916 1531 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 GOLGA8CPA6NN73 597 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 TTC4O95801 387 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 SHBGP04278 402 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 GARTP22102 1010 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 PDE1CQ14123 709 aaPredicted RBP12.24□□□□□ -0.45
SYNPO-204ENST00000519664 GOLGA7BQ2TAP0 167 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 PAN2Q504Q3 1202 aaKnown RBP12.24□□□□□ -0.45
SYNPO-204ENST00000519664 MFSD7Q6UXD7 560 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 ZNF677Q86XU0 584 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 FBXO36Q8NEA4 188 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 HSD17B14Q9BPX1 270 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 THTPAQ9BU02 230 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 DNAJC18Q9H819 358 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms