RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SLC25A3Q00325 362 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 BTKQ06187 659 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 DYRK1AQ13627 763 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 MORC3Q14149 939 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 HLXQ14774 488 aaPredicted RBP5.49□□□□□ -1.53
SQLE-202ENST00000518604 IQCB1Q15051 598 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 LONRF1Q17RB8 773 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 SP5Q6BEB4 398 aaPredicted RBP5.49□□□□□ -1.53
SQLE-202ENST00000518604 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.49□□□□□ -1.53
SQLE-202ENST00000518604 PRRT2Q7Z6L0 340 aaPredicted RBP5.49□□□□□ -1.53
SQLE-202ENST00000518604 GAS2L3Q86XJ1 694 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 COLGALT2Q8IYK4 626 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 SLC15A4Q8N697 577 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 ACRBPQ8NEB7 543 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 ZNF483Q8TF39 744 aaPredicted RBP5.49□□□□□ -1.53
SQLE-202ENST00000518604 IPCEF1Q8WWN9 437 aaPredicted RBP5.49□□□□□ -1.53
SQLE-202ENST00000518604 BRI3BPQ8WY22 251 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 LENG9Q96B70 501 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 CCDC138Q96M89 665 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 BRIP1Q9BX63 1249 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 TEX101Q9BY14 249 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 ZNF768Q9H5H4 540 aaKnown RBP5.49□□□□□ -1.53
SQLE-202ENST00000518604 ZSCAN32Q9NX65 697 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 DKK2Q9UBU2 259 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 CORO2BQ9UQ03 480 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 AATKQ6ZMQ8 1374 aa5.49□□□□□ -1.53
SQLE-202ENST00000518604 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 CCDC78A2IDD5 438 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 PYCARD-AS1I3L0S3 204 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 SUN1O94901 812 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 MYL3P08590 195 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 DDX6P26196 483 aaKnown RBP eCLIP5.48□□□□□ -1.53
SQLE-202ENST00000518604 KLRC1P26715 233 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 PTGS2P35354 604 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 FAM189BP81408 668 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 FPGSQ05932 587 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 RESTQ13127 1097 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 FOXE3Q13461 319 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 CYP2A13Q16696 494 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 C3orf38Q5JPI3 329 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 TOGARAM2Q6ZUX3 1019 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 MICALCLQ6ZW33 695 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 SYNE4Q8N205 404 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 PSD4Q8NDX1 1056 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 PARD3BQ8TEW8 1205 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 CACTINQ8WUQ7 758 aaKnown RBP5.48□□□□□ -1.53
SQLE-202ENST00000518604 LRIG1Q96JA1 1093 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 PLEKHG4BQ96PX9 1271 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 RPS6KC1Q96S38 1066 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 NELL2Q99435 816 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 ALOXE3Q9BYJ1 711 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 XPNPEP3Q9NQH7 507 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 VSX1Q9NZR4 365 aaPredicted RBP5.48□□□□□ -1.53
SQLE-202ENST00000518604 SHOC2Q9UQ13 582 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 COMMD10Q9Y6G5 202 aa5.48□□□□□ -1.53
SQLE-202ENST00000518604 TOR1BO14657 336 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 KPNA5O15131 536 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 VPS4BO75351 444 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 CDKL5O76039 1030 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 NDUFA10O95299 355 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 FOSP01100 380 aaPredicted RBP5.47□□□□□ -1.53
SQLE-202ENST00000518604 ADRB1P08588 477 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 PARP1P09874 1014 aaKnown RBP5.47□□□□□ -1.53
SQLE-202ENST00000518604 ITGALP20701 1170 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 LRPAP1P30533 357 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 STT3AP46977 705 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 GCLCP48506 637 aaPredicted RBP5.47□□□□□ -1.53
SQLE-202ENST00000518604 TOB1P50616 345 aaPredicted RBP5.47□□□□□ -1.53
SQLE-202ENST00000518604 VAV2P52735 878 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 RPS16P62249 146 aaKnown RBP5.47□□□□□ -1.53
SQLE-202ENST00000518604 TIGD2Q4W5G0 525 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 MIIPQ5JXC2 388 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 SFRP4Q6FHJ7 346 aaPredicted RBP5.47□□□□□ -1.53
SQLE-202ENST00000518604 TAF2Q6P1X5 1199 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 LAYNQ6UX15 382 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 SLC30A10Q6XR72 485 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 SRLQ86TD4 932 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 MORC1Q86VD1 984 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 MPP5Q8N3R9 675 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 ATP11CQ8NB49 1132 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 NSUN7Q8NE18 718 aaKnown RBP5.47□□□□□ -1.53
SQLE-202ENST00000518604 CPEB3Q8NE35 698 aaKnown RBP5.47□□□□□ -1.53
SQLE-202ENST00000518604 DEPTORQ8TB45 409 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 HAS1Q92839 578 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 SPSB4Q96A44 273 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 RNF31Q96EP0 1072 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 ZNF503Q96F45 646 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 SLC46A1Q96NT5 459 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 MPHOSPH6Q99547 160 aaKnown RBP5.47□□□□□ -1.53
SQLE-202ENST00000518604 GPR20Q99678 358 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 MESP1Q9BRJ9 268 aa5.47□□□□□ -1.53
SQLE-202ENST00000518604 MS4A7Q9GZW8 240 aaPredicted RBP5.47□□□□□ -1.53
SQLE-202ENST00000518604 POM121BA6NF01 834 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 TRIAP1O43715 76 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 PEX14O75381 377 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 INMTO95050 263 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 MT-ND5P03915 603 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 ANXA2P07355 339 aaKnown RBP5.46□□□□□ -1.54
SQLE-202ENST00000518604 C1SP09871 688 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 TSHRP16473 764 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms