RNA–Protein interactions for RNA: ENST00000517656.5

CTNNA1-204, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-204ENST00000517656 C8orf33Q9H7E9 229 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-204ENST00000517656 MRPL44Q9H9J2 332 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-204ENST00000517656 IL21Q9HBE4 155 aa9.1□□□□□ -0.95
CTNNA1-204ENST00000517656 OLFML3Q9NRN5 406 aa9.1□□□□□ -0.95
CTNNA1-204ENST00000517656 NCDNQ9UBB6 729 aa9.1□□□□□ -0.95
CTNNA1-204ENST00000517656 SMG5Q9UPR3 1016 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-204ENST00000517656 EXOC7Q9UPT5 735 aa9.1□□□□□ -0.95
CTNNA1-204ENST00000517656 MORC2Q9Y6X9 1032 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-204ENST00000517656 TSC2P49815 1807 aa9.1□□□□□ -0.95
CTNNA1-204ENST00000517656 FRMD3A2A2Y4 597 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 MYBPHLA2RUH7 354 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 SLC38A8A6NNN8 435 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 KPNA7A9QM74 516 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 DPYSL4O14531 572 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 GCNT3O95395 438 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 PRAMEF12O95522 483 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 HAPLN1P10915 354 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 SYT1P21579 422 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 GARTP22102 1010 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 KPNA1P52294 538 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 CYP4F8P98187 520 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 KCNA1Q09470 495 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 ALCAMQ13740 583 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 LRRC32Q14392 662 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 GAS6Q14393 721 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 PUM1Q14671 1186 aaKnown RBP eCLIP9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 FAM173BQ6P4H8 233 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 CCDC73Q6ZRK6 1079 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 LRRTM3Q86VH5 581 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 RALGPS2Q86X27 583 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 BRSK2Q8IWQ3 736 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 DCP1BQ8IZD4 617 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 GPR161Q8N6U8 529 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 SECISBP2LQ93073 1101 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 GCNAQ96QF7 691 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 FAM213AQ9BRX8 229 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 DLL3Q9NYJ7 618 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 ZMYM5Q9UJ78 669 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 PCDHB13Q9Y5F0 798 aa9.09□□□□□ -0.95
CTNNA1-204ENST00000517656 NCOR2Q9Y618 2525 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 SPECC1L-ADORA2AF8WAN1 911 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 PAPSS2O95340 614 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 LDHAP00338 332 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 ITGB3P05106 788 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 POLR2BP30876 1174 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 CTHP32929 405 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 STAT6P42226 847 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 CXCL12P48061 93 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 SOX9P48436 509 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 CASP5P51878 434 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 WNT7BP56706 349 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 TFAMQ00059 246 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 TSPY1Q01534 308 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 SATB1Q01826 763 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 CEBPZQ03701 1054 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 SLC39A14Q15043 492 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 TAF12Q16514 161 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 NFE2Q16621 373 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 WDR44Q5JSH3 913 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 DGKKQ5KSL6 1271 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 TXNDC11Q6PKC3 985 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 DGLUCYQ7Z3D6 616 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 GPIHBP1Q8IV16 184 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 SPEM1Q8N4L4 309 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 LRRC52Q8N7C0 313 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 C1orf127Q8N9H9 656 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 ZSWIM2Q8NEG5 633 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 CXorf38Q8TB03 319 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 BPIFB1Q8TDL5 484 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 GIPC2Q8TF65 315 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 LEO1Q8WVC0 666 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 SAAL1Q96ER3 474 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 INTS4Q96HW7 963 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 ZFYVE19Q96K21 471 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 SLC46A2Q9BY10 475 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 ABI2Q9NYB9 513 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 RBAKQ9NYW8 714 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 GTSE1Q9NYZ3 720 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 TBC1D7Q9P0N9 293 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 AGAP1Q9UPQ3 857 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 MTMR6Q9Y217 621 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 PCDHB5Q9Y5E4 795 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 GTF3C3Q9Y5Q9 886 aa9.08□□□□□ -0.96
CTNNA1-204ENST00000517656 TICRRQ7Z2Z1 1910 aa9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 A0A087X0B3 334 aa9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 SOBPA7XYQ1 873 aa9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 EXTL3O43909 919 aa9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 HUS1O60921 280 aa9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 F11P03951 625 aa9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 IDEP14735 1019 aa9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 HMGA1P17096 107 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 DDX6P26196 483 aaKnown RBP eCLIP9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 CDR1P51861 262 aa9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 NLRP12P59046 1061 aa9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 CCINQ13939 588 aa9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 RSPO4Q2I0M5 234 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 Q6ZS52 159 aa9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 TMEM150AQ86TG1 271 aa9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 SYCP3Q8IZU3 236 aa9.07□□□□□ -0.96
CTNNA1-204ENST00000517656 CMTM8Q8IZV2 173 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms