RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 DDB2Q92466 427 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ANKS1AQ92625 1134 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 C1orf43Q9BWL3 253 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ARHGEF3Q9NR81 526 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ETAA1Q9NY74 926 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 FLRT1Q9NZU1 646 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ABCF2Q9UG63 623 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SERPINB13Q9UIV8 391 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ZDHHC8Q9ULC8 765 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 AOX1Q06278 1338 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 CGB1A6NKQ9 187 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 TARM1B6A8C7 271 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 NT5C1B-RDH14C9J2C7 533 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 QSOX1O00391 747 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 JTBO76095 146 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 KIF20AO95235 890 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 FTLP02792 175 aaPredicted RBP3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 PDCP20941 246 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 DRD4P21917 467 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ITPKBP27987 946 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 RECQLP46063 649 aaPredicted RBP3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 KRTAP10-11P60412 298 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SATB1Q01826 763 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ODF1Q14990 250 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 AMOTQ4VCS5 1084 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ZNF618Q5T7W0 954 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SLC29A4Q7RTT9 530 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ZNF804AQ7Z570 1209 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 PRPF38AQ8NAV1 312 aaKnown RBP3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 FANCBQ8NB91 859 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SCARB1Q8WTV0 552 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 RFKQ969G6 155 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 RGMAQ96B86 450 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 FAM167AQ96KS9 214 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SMOC2Q9H3U7 446 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 NRIP3Q9NQ35 241 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SERTAD4Q9NUC0 356 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SH3BP4Q9P0V3 963 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 TNKSO95271 1327 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 WASHC2CQ9Y4E1 1318 aa3.68□□□□□ -1.82
RNU6-1088P-201ENST00000516850 COL3A1P02461 1466 aaPredicted RBP3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 LRRC14BA6NHZ5 514 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 LINC01548A6NM66 108 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 M0QYG6 137 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 FZD9O00144 591 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 TLR5O60602 858 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 GCLCP48506 637 aaPredicted RBP3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 CDKN1CP49918 316 aaPredicted RBP3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 FXR1P51114 621 aaKnown RBP eCLIP3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 EVA1CP58658 441 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 EIF2B5Q13144 721 aaKnown RBP3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 NOGQ13253 232 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 FAM160B1Q5W0V3 765 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ICE2Q659A1 982 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ANKRD16Q6P6B7 361 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 HEATR3Q7Z4Q2 680 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 FAM90A1Q86YD7 464 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 VGLL2Q8N8G2 317 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 FAM46DQ8NEK8 389 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 DPF1Q92782 380 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SMAD5Q99717 465 aaKnown RBP3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 C1QTNF7Q9BXJ2 289 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SEMA4CQ9C0C4 833 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 TINAGL1Q9GZM7 467 aaPredicted RBP3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 LMBRD1Q9NUN5 540 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 PNPOQ9NVS9 261 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ADAM21Q9UKJ8 722 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 AGAP1Q9UPQ3 857 aa3.67□□□□□ -1.82
RNU6-1088P-201ENST00000516850 WIPF3A6NGB9 483 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 H3BUI4 141 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 PPM1DO15297 605 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SLC16A3O15427 465 aaKnown RBP3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 IL33O95760 270 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ONECUT2O95948 504 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 KELP23276 732 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 CERS1P27544 350 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 HK3P52790 923 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SLC44A4Q53GD3 710 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 MTX3Q5HYI7 312 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 TMEM108Q6UXF1 575 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 USP45Q70EL2 814 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 WDR53Q7Z5U6 358 aaPredicted RBP3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 DTX2Q86UW9 622 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 KLHDC4Q8TBB5 520 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 BRIX1Q8TDN6 353 aaKnown RBP3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 TBC1D5Q92609 795 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ZNF778Q96MU6 729 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 MRPL46Q9H2W6 279 aaKnown RBP3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 DKK3Q9UBP4 350 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ZNF70Q9UC06 446 aaPredicted RBP3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 CCNL1Q9UK58 526 aaPredicted RBP3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ZNF804BA4D1E1 1349 aa3.66□□□□□ -1.82
RNU6-1088P-201ENST00000516850 PRSS29PA6NIE9 313 aa3.65□□□□□ -1.83
RNU6-1088P-201ENST00000516850 ATXN1LP0C7T5 689 aaKnown RBP3.65□□□□□ -1.83
RNU6-1088P-201ENST00000516850 PRR35P0CG20 571 aa3.65□□□□□ -1.83
RNU6-1088P-201ENST00000516850 TYRP14679 529 aa3.65□□□□□ -1.83
RNU6-1088P-201ENST00000516850 VCAM1P19320 739 aa3.65□□□□□ -1.83
RNU6-1088P-201ENST00000516850 CYP2C18P33260 490 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms