RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 HAUS4Q9H6D7 363 aa8.94□□□□□ -0.98
SFXN1-211ENST00000515736 CRTAC1Q9NQ79 661 aa8.94□□□□□ -0.98
SFXN1-211ENST00000515736 OLFML3Q9NRN5 406 aa8.94□□□□□ -0.98
SFXN1-211ENST00000515736 ARGLU1Q9NWB6 273 aaPredicted RBP8.94□□□□□ -0.98
SFXN1-211ENST00000515736 VAV3Q9UKW4 847 aa8.94□□□□□ -0.98
SFXN1-211ENST00000515736 SPEF1Q9Y4P9 236 aa8.94□□□□□ -0.98
SFXN1-211ENST00000515736 SMCHD1A6NHR9 2005 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 IGLV3-22A0A075B6J6 115 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 A0A0G2JLL6 359 aaPredicted RBP8.93□□□□□ -0.98
SFXN1-211ENST00000515736 TTC26A0AVF1 554 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 H0Y8X5 98 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 GABRDO14764 452 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 EIF3DO15371 548 aaKnown RBP eCLIP8.93□□□□□ -0.98
SFXN1-211ENST00000515736 SLC16A3O15427 465 aaKnown RBP8.93□□□□□ -0.98
SFXN1-211ENST00000515736 MSH4O15457 936 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 SIGLEC6O43699 453 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 CALUO43852 315 aaPredicted RBP8.93□□□□□ -0.98
SFXN1-211ENST00000515736 CAND2O75155 1236 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 FARP2O94887 1054 aaPredicted RBP8.93□□□□□ -0.98
SFXN1-211ENST00000515736 NDUFA10O95299 355 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 KRT18P05783 430 aaKnown RBP8.93□□□□□ -0.98
SFXN1-211ENST00000515736 GJB1P08034 283 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 FCER1AP12319 257 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 ELNP15502 786 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 NAT1P18440 290 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 CYP11B2P19099 503 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 RPL13P26373 211 aaKnown RBP8.93□□□□□ -0.98
SFXN1-211ENST00000515736 SLC12A3P55017 1021 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 GNG11P61952 73 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 DPY19L1Q2PZI1 675 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 USH1GQ495M9 461 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 CEP55Q53EZ4 464 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 MIIPQ5JXC2 388 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 FAM83BQ5T0W9 1011 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 CDPF1Q6NVV7 123 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 XRRA1Q6P2D8 792 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 RAD9BQ6WBX8 426 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 LRRC55Q6ZSA7 311 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 TOGARAM2Q6ZUX3 1019 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 TMC3Q7Z5M5 1100 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 PRRT2Q7Z6L0 340 aaPredicted RBP8.93□□□□□ -0.98
SFXN1-211ENST00000515736 C14orf80Q86SX3 495 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 ZBTB46Q86UZ6 589 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 GPBP1Q86WP2 473 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 MNS1Q8NEH6 495 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 U2AF1L4Q8WU68 220 aaKnown RBP8.93□□□□□ -0.98
SFXN1-211ENST00000515736 COPS5Q92905 334 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 SLC5A5Q92911 643 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 TIPINQ9BVW5 301 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 PLVAPQ9BX97 442 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 AS3MTQ9HBK9 375 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 SLC39A2Q9NP94 309 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 LUC7LQ9NQ29 371 aaKnown RBP8.93□□□□□ -0.98
SFXN1-211ENST00000515736 AASDHPPTQ9NRN7 309 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 SAMD15Q9P1V8 674 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 ODF2LQ9ULJ1 636 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 GABRQQ9UN88 632 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 TRAF3IP3Q9Y228 551 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 NR2E3Q9Y5X4 410 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 EPN1Q9Y6I3 576 aaPredicted RBP8.93□□□□□ -0.98
SFXN1-211ENST00000515736 ATP8B3O60423 1300 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 FRMPD4Q14CM0 1322 aa8.93□□□□□ -0.98
SFXN1-211ENST00000515736 COL11A1P12107 1806 aaPredicted RBP8.93□□□□□ -0.98
SFXN1-211ENST00000515736 RLFQ13129 1914 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 RPTORQ8N122 1335 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 CTAGE9A4FU28 777 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 B4DLN1 442 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 EIF3CLB5ME19 914 aaKnown RBP8.92□□□□□ -0.98
SFXN1-211ENST00000515736 FAM86B1E9PN63 330 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 PES1O00541 588 aaKnown RBP8.92□□□□□ -0.98
SFXN1-211ENST00000515736 PDXKO00764 312 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 CETN3O15182 167 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 KRT86O43790 486 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 TBCAO75347 108 aaKnown RBP8.92□□□□□ -0.98
SFXN1-211ENST00000515736 MED24O75448 989 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 PSMD10O75832 226 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 TFRCP02786 760 aaKnown RBP8.92□□□□□ -0.98
SFXN1-211ENST00000515736 FAM86B2P0C5J1 330 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 PYGMP11217 842 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 ANXA13P27216 316 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 FLT3LGP49771 235 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 OAZ1P54368 228 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 GUCY1A3Q02108 690 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 ALCAMQ13740 583 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 MYBPC2Q14324 1141 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 RRP1BQ14684 758 aaKnown RBP8.92□□□□□ -0.98
SFXN1-211ENST00000515736 GLIPR1L2Q4G1C9 344 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 HERC4Q5GLZ8 1057 aaPredicted RBP8.92□□□□□ -0.98
SFXN1-211ENST00000515736 RSPO2Q6UXX9 243 aaPredicted RBP8.92□□□□□ -0.98
SFXN1-211ENST00000515736 LINC00114Q6XXX2 140 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 KCNK18Q7Z418 384 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 FRMD5Q7Z6J6 570 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 DDX53Q86TM3 631 aaKnown RBP8.92□□□□□ -0.98
SFXN1-211ENST00000515736 CATSPER3Q86XQ3 398 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 CEP112Q8N8E3 955 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 SLC17A8Q8NDX2 589 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 GOLGA5Q8TBA6 731 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 EIF3CQ99613 913 aaKnown RBP8.92□□□□□ -0.98
SFXN1-211ENST00000515736 ZFYVE21Q9BQ24 234 aa8.92□□□□□ -0.98
SFXN1-211ENST00000515736 SLF1Q9BQI6 1058 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms