RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 DDX43Q9NXZ2 648 aaKnown RBP26.33■■□□□ 1.81
SNF8-213ENST00000514929 ABI2Q9NYB9 513 aaPredicted RBP26.33■■□□□ 1.81
SNF8-213ENST00000514929 PRPF40AO75400 957 aaKnown RBP26.32■■□□□ 1.8
SNF8-213ENST00000514929 MOSPD3O75425 235 aa26.32■■□□□ 1.8
SNF8-213ENST00000514929 VEPH1Q14D04 833 aa26.32■■□□□ 1.8
SNF8-213ENST00000514929 FAM78AQ5JUQ0 283 aa26.32■■□□□ 1.8
SNF8-213ENST00000514929 TANGO2Q6ICL3 276 aa26.32■■□□□ 1.8
SNF8-213ENST00000514929 TRAPPC11Q7Z392 1133 aa26.32■■□□□ 1.8
SNF8-213ENST00000514929 DNAJB7Q7Z6W7 309 aaPredicted RBP26.32■■□□□ 1.8
SNF8-213ENST00000514929 TOP6BLQ8N6T0 577 aa26.32■■□□□ 1.8
SNF8-213ENST00000514929 PSMG2Q969U7 264 aa26.32■■□□□ 1.8
SNF8-213ENST00000514929 ELSPBP1Q96BH3 223 aa26.32■■□□□ 1.8
SNF8-213ENST00000514929 CGRRF1Q99675 332 aa26.32■■□□□ 1.8
SNF8-213ENST00000514929 SLITRK6Q9H5Y7 841 aa26.32■■□□□ 1.8
SNF8-213ENST00000514929 PCDHB5Q9Y5E4 795 aa26.32■■□□□ 1.8
SNF8-213ENST00000514929 A0A1W2PRU2 124 aa26.31■■□□□ 1.8
SNF8-213ENST00000514929 NRG2O14511 850 aaPredicted RBP26.31■■□□□ 1.8
SNF8-213ENST00000514929 RPN1P04843 607 aaKnown RBP26.31■■□□□ 1.8
SNF8-213ENST00000514929 PFKPQ01813 784 aa26.31■■□□□ 1.8
SNF8-213ENST00000514929 TCF15Q12870 199 aa26.31■■□□□ 1.8
SNF8-213ENST00000514929 TEAD2Q15562 447 aa26.31■■□□□ 1.8
SNF8-213ENST00000514929 TMC8Q8IU68 726 aa26.31■■□□□ 1.8
SNF8-213ENST00000514929 ADGRF2Q8IZF7 708 aa26.31■■□□□ 1.8
SNF8-213ENST00000514929 SHKBP1Q8TBC3 707 aa26.31■■□□□ 1.8
SNF8-213ENST00000514929 ASB16Q96NS5 453 aa26.31■■□□□ 1.8
SNF8-213ENST00000514929 ACBD6Q9BR61 282 aa26.31■■□□□ 1.8
SNF8-213ENST00000514929 LRRC3Q9BY71 257 aa26.31■■□□□ 1.8
SNF8-213ENST00000514929 PLA2G2FQ9BZM2 168 aa26.31■■□□□ 1.8
SNF8-213ENST00000514929 TBC1D17Q9HA65 648 aa26.31■■□□□ 1.8
SNF8-213ENST00000514929 ZFP14Q9HCL3 533 aa26.31■■□□□ 1.8
SNF8-213ENST00000514929 GALR2O43603 387 aaPredicted RBP26.3■■□□□ 1.8
SNF8-213ENST00000514929 PI15O43692 258 aa26.3■■□□□ 1.8
SNF8-213ENST00000514929 LHX1P48742 406 aa26.3■■□□□ 1.8
SNF8-213ENST00000514929 NUCB2P80303 420 aa26.3■■□□□ 1.8
SNF8-213ENST00000514929 TAF12Q16514 161 aa26.3■■□□□ 1.8
SNF8-213ENST00000514929 NFE2Q16621 373 aaPredicted RBP26.3■■□□□ 1.8
SNF8-213ENST00000514929 KRBA2Q6ZNG9 492 aa26.3■■□□□ 1.8
SNF8-213ENST00000514929 SPATA18Q8TC71 538 aa26.3■■□□□ 1.8
SNF8-213ENST00000514929 SMARCD2Q92925 531 aa26.3■■□□□ 1.8
SNF8-213ENST00000514929 ZSWIM3Q96MP5 696 aa26.3■■□□□ 1.8
SNF8-213ENST00000514929 LPIN3Q9BQK8 851 aa26.3■■□□□ 1.8
SNF8-213ENST00000514929 GPR88Q9GZN0 384 aa26.3■■□□□ 1.8
SNF8-213ENST00000514929 GOLPH3LQ9H4A5 285 aa26.3■■□□□ 1.8
SNF8-213ENST00000514929 FGF19O95750 216 aa26.29■■□□□ 1.8
SNF8-213ENST00000514929 PRR29P0C7W0 189 aa26.29■■□□□ 1.8
SNF8-213ENST00000514929 HAPLN1P10915 354 aaPredicted RBP26.29■■□□□ 1.8
SNF8-213ENST00000514929 ATF6P18850 670 aa26.29■■□□□ 1.8
SNF8-213ENST00000514929 FCARP24071 287 aa26.29■■□□□ 1.8
SNF8-213ENST00000514929 ACAT1P24752 427 aaKnown RBP26.29■■□□□ 1.8
SNF8-213ENST00000514929 SOWAHAQ2M3V2 549 aa26.29■■□□□ 1.8
SNF8-213ENST00000514929 DPH6Q7L8W6 267 aa26.29■■□□□ 1.8
SNF8-213ENST00000514929 OSTM1Q86WC4 334 aa26.29■■□□□ 1.8
SNF8-213ENST00000514929 ZSCAN18Q8TBC5 510 aaPredicted RBP26.29■■□□□ 1.8
SNF8-213ENST00000514929 SHDQ96IW2 340 aa26.29■■□□□ 1.8
SNF8-213ENST00000514929 ZNF334Q9HCZ1 680 aaPredicted RBP26.29■■□□□ 1.8
SNF8-213ENST00000514929 TMLHEQ9NVH6 421 aa26.29■■□□□ 1.8
SNF8-213ENST00000514929 GABRR2P28476 465 aa26.28■■□□□ 1.8
SNF8-213ENST00000514929 PCSK1P29120 753 aa26.28■■□□□ 1.8
SNF8-213ENST00000514929 SNW1Q13573 536 aaKnown RBP26.28■■□□□ 1.8
SNF8-213ENST00000514929 INTS6LQ5JSJ4 861 aaKnown RBP26.28■■□□□ 1.8
SNF8-213ENST00000514929 PHLDB3Q6NSJ2 640 aa26.28■■□□□ 1.8
SNF8-213ENST00000514929 GIPC2Q8TF65 315 aa26.28■■□□□ 1.8
SNF8-213ENST00000514929 IRF2BPLQ9H1B7 796 aa26.28■■□□□ 1.8
SNF8-213ENST00000514929 ATXN3LQ9H3M9 355 aa26.28■■□□□ 1.8
SNF8-213ENST00000514929 GABRDO14764 452 aa26.27■■□□□ 1.8
SNF8-213ENST00000514929 ZNF202O95125 648 aa26.27■■□□□ 1.8
SNF8-213ENST00000514929 KIF20AO95235 890 aa26.27■■□□□ 1.8
SNF8-213ENST00000514929 DPYDQ12882 1025 aa26.27■■□□□ 1.8
SNF8-213ENST00000514929 SLC44A4Q53GD3 710 aa26.27■■□□□ 1.8
SNF8-213ENST00000514929 CCDC34Q96HJ3 373 aa26.27■■□□□ 1.8
SNF8-213ENST00000514929 MMS19Q96T76 1030 aa26.27■■□□□ 1.8
SNF8-213ENST00000514929 PI4K2AQ9BTU6 479 aa26.27■■□□□ 1.8
SNF8-213ENST00000514929 KCTD10Q9H3F6 313 aa26.27■■□□□ 1.8
SNF8-213ENST00000514929 GTF3C4Q9UKN8 822 aa26.27■■□□□ 1.8
SNF8-213ENST00000514929 H0Y858 1186 aa26.26■■□□□ 1.79
SNF8-213ENST00000514929 PDXKO00764 312 aa26.26■■□□□ 1.79
SNF8-213ENST00000514929 CST3P01034 146 aaPredicted RBP26.26■■□□□ 1.79
SNF8-213ENST00000514929 TRPC3Q13507 836 aa26.26■■□□□ 1.79
SNF8-213ENST00000514929 GRM2Q14416 872 aa26.26■■□□□ 1.79
SNF8-213ENST00000514929 MLF2Q15773 248 aaPredicted RBP26.26■■□□□ 1.79
SNF8-213ENST00000514929 GAREM2Q75VX8 874 aa26.26■■□□□ 1.79
SNF8-213ENST00000514929 GCNAQ96QF7 691 aa26.26■■□□□ 1.79
SNF8-213ENST00000514929 TRMT61BQ9BVS5 477 aaKnown RBP26.26■■□□□ 1.79
SNF8-213ENST00000514929 GOLGA6L4A6NEF3 574 aa26.25■■□□□ 1.79
SNF8-213ENST00000514929 HCRTO43612 131 aa26.25■■□□□ 1.79
SNF8-213ENST00000514929 PHACTR2O75167 634 aa26.25■■□□□ 1.79
SNF8-213ENST00000514929 RHOBTB3O94955 611 aa26.25■■□□□ 1.79
SNF8-213ENST00000514929 HOXD11P31277 338 aaPredicted RBP26.25■■□□□ 1.79
SNF8-213ENST00000514929 VIPR2P41587 438 aa26.25■■□□□ 1.79
SNF8-213ENST00000514929 CASP4P49662 377 aa26.25■■□□□ 1.79
SNF8-213ENST00000514929 STARD6P59095 220 aa26.25■■□□□ 1.79
SNF8-213ENST00000514929 PRKCQQ04759 706 aa26.25■■□□□ 1.79
SNF8-213ENST00000514929 ARHGAP15Q53QZ3 475 aa26.25■■□□□ 1.79
SNF8-213ENST00000514929 SLC9A9Q8IVB4 645 aa26.25■■□□□ 1.79
SNF8-213ENST00000514929 CCDC105Q8IYK2 499 aa26.25■■□□□ 1.79
SNF8-213ENST00000514929 ZNF516Q92618 1163 aa26.25■■□□□ 1.79
SNF8-213ENST00000514929 ATOH1Q92858 354 aaPredicted RBP26.25■■□□□ 1.79
SNF8-213ENST00000514929 GZF1Q9H116 711 aaPredicted RBP26.25■■□□□ 1.79
SNF8-213ENST00000514929 BRD9Q9H8M2 597 aa26.25■■□□□ 1.79
SNF8-213ENST00000514929 TRPV4Q9HBA0 871 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms