RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 GOLGA2P5Q9HBQ8 144 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 HESX1Q9UBX0 185 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 CNOT8Q9UFF9 292 aaKnown RBP16.99■□□□□ 0.31
NUP54-214ENST00000514307 TBX21Q9UL17 535 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 STRIP2Q9ULQ0 834 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 STXBP5LQ9Y2K9 1186 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 SAR1BQ9Y6B6 198 aa16.99■□□□□ 0.31
NUP54-214ENST00000514307 EFCAB14O75071 495 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 PALMO75781 387 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 B3GAT3O94766 335 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 MTA2O94776 668 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 TIMP1P01033 207 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 CALCAP01258 141 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 ALDH2P05091 517 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 SLC8A3P57103 927 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 NOMO3P69849 1222 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 TAP1Q03518 808 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 CNKSR3Q6P9H4 555 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 NPAS4Q8IUM7 802 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 ADGRF2Q8IZF7 708 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 THEM5Q8N1Q8 247 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 TMEM199Q8N511 208 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 DIS3LQ8TF46 1054 aaKnown RBP16.98■□□□□ 0.31
NUP54-214ENST00000514307 SCLYQ96I15 445 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 COLEC11Q9BWP8 271 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 PARVAQ9NVD7 372 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 WDR35Q9P2L0 1181 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 SALL4Q9UJQ4 1053 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 CDC23Q9UJX2 597 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 SCINQ9Y6U3 715 aa16.98■□□□□ 0.31
NUP54-214ENST00000514307 ABHD14A-ACY1A0A1B0GW23 586 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 CASTOR2A6NHX0 329 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 KIAA0355O15063 1070 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 PDGFRBP09619 1106 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 SETSIPP0DME0 302 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 ODC1P11926 461 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 TCP1P17987 556 aaKnown RBP16.97■□□□□ 0.31
NUP54-214ENST00000514307 MMP8P22894 467 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 AFF1P51825 1210 aaKnown RBP16.97■□□□□ 0.31
NUP54-214ENST00000514307 RPS6KA1Q15418 735 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 ARHGAP17Q68EM7 881 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 SLFN11Q7Z7L1 901 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 DAAM2Q86T65 1068 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 ACOT1Q86TX2 421 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 TMEM130Q8N3G9 435 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 PDCL2Q8N4E4 241 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 LINC01599Q8WXQ3 324 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 MRPL9Q9BYD2 267 aaKnown RBP16.97■□□□□ 0.31
NUP54-214ENST00000514307 L2HGDHQ9H9P8 463 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 RNF14Q9UBS8 474 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 AMFRQ9UKV5 643 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 L1RE1Q9UN81 338 aa16.97■□□□□ 0.31
NUP54-214ENST00000514307 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.97■□□□□ 0.31
NUP54-214ENST00000514307 CENPFP49454 3210 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 O00370 1275 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 GABRDO14764 452 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 MICAL2O94851 1124 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 PFKMP08237 780 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 RAG1P15918 1043 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 PCSK1P29120 753 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 AARSP49588 968 aaKnown RBP eCLIP16.96■□□□□ 0.31
NUP54-214ENST00000514307 ZNF268Q14587 947 aaPredicted RBP16.96■□□□□ 0.31
NUP54-214ENST00000514307 WHAMMP3Q1A5X7 153 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 LRRC26Q2I0M4 334 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 CLLU1OSQ5K130 101 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 MEI1Q5TIA1 1274 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 DENND1BQ6P3S1 775 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 PEX26Q7Z412 305 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 DEFB128Q7Z7B8 93 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 PASD1Q8IV76 773 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 MNS1Q8NEH6 495 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 STK32AQ8WU08 396 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 C18orf8Q96DM3 657 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 TWNKQ96RR1 684 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 NUP85Q9BW27 656 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 WNT8AQ9H1J5 351 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 SYNCQ9H7C4 482 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 CAPN6Q9Y6Q1 641 aa16.96■□□□□ 0.31
NUP54-214ENST00000514307 GRID2IPA4D2P6 1211 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 MYO1FO00160 1098 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 TADA2AO75478 443 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 CFHP08603 1231 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 PTPN1P18031 435 aaKnown RBP16.95■□□□□ 0.3
NUP54-214ENST00000514307 WSCD1Q658N2 575 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 MON1BQ7L1V2 547 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 DNAAF5Q86Y56 855 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 WDTC1Q8N5D0 677 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 CEP112Q8N8E3 955 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 ANKRD52Q8NB46 1076 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 KBTBD7Q8WVZ9 684 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 ARHGEF26Q96DR7 871 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 ZSWIM1Q9BR11 485 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 SELENOOQ9BVL4 669 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 TBC1D13Q9NVG8 400 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 CDH9Q9ULB4 789 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 HYOU1Q9Y4L1 999 aa16.95■□□□□ 0.3
NUP54-214ENST00000514307 CARNS1A5YM72 827 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 TMEM189-UBE2V1I3L0A0 370 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 M0QYV0 167 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 M0QZQ0 153 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms