RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 K7ENP7 123 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 DHX15O43143 795 aaKnown RBP8.42□□□□□ -1.06
CLDND1-229ENST00000513988 GRK6P43250 576 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 USP11P51784 963 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 CYP4A11Q02928 519 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 HLA-BQ31612 363 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 MTERF2Q49AM1 385 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 WDR45BQ5MNZ6 344 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 HES3Q5TGS1 186 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 CC2D1AQ6P1N0 951 aaPredicted RBP8.42□□□□□ -1.06
CLDND1-229ENST00000513988 NOTUMQ6P988 496 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 INO80CQ6PI98 192 aaPredicted RBP8.42□□□□□ -1.06
CLDND1-229ENST00000513988 IL27RAQ6UWB1 636 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 SRGAP1Q7Z6B7 1085 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 TICAM1Q8IUC6 712 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 SRRM1Q8IYB3 904 aaKnown RBP8.42□□□□□ -1.06
CLDND1-229ENST00000513988 CPA6Q8N4T0 437 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 RRP36Q96EU6 259 aaKnown RBP8.42□□□□□ -1.06
CLDND1-229ENST00000513988 ARHGAP9Q9BRR9 750 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.42□□□□□ -1.06
CLDND1-229ENST00000513988 SMG9Q9H0W8 520 aaKnown RBP8.42□□□□□ -1.06
CLDND1-229ENST00000513988 MINDY3Q9H8M7 445 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 ZSWIM5Q9P217 1185 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 FTSJ1Q9UET6 329 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 PARP2Q9UGN5 583 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 SEC63Q9UGP8 760 aaKnown RBP8.42□□□□□ -1.06
CLDND1-229ENST00000513988 PCDHGA1Q9Y5H4 931 aa8.42□□□□□ -1.06
CLDND1-229ENST00000513988 ARID2Q68CP9 1835 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 IGKV6-21A0A0C4DH24 114 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 A0A1B0GTW7 788 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 TCRBV21S2A2A0A5A6 115 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 ESYT2A0FGR8 921 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 TRAPPC3O43617 180 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 KLF8O95600 359 aaPredicted RBP8.41□□□□□ -1.06
CLDND1-229ENST00000513988 CDK4P11802 303 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 WEE1P30291 646 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 AXLP30530 894 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 NCBP1Q09161 790 aaKnown RBP8.41□□□□□ -1.06
CLDND1-229ENST00000513988 PDGFRLQ15198 375 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 TARBP2Q15633 366 aaKnown RBP8.41□□□□□ -1.06
CLDND1-229ENST00000513988 IGFBP7Q16270 282 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 PPP1R18Q6NYC8 613 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 ALLCQ8N6M5 410 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 TXNDC5Q8NBS9 432 aaKnown RBP8.41□□□□□ -1.06
CLDND1-229ENST00000513988 POM121Q96HA1 1249 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 HIC2Q96JB3 615 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 ZNF578Q96N58 590 aaPredicted RBP8.41□□□□□ -1.06
CLDND1-229ENST00000513988 LRRC3Q9BY71 257 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 DPH1Q9BZG8 443 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 TBC1D22BQ9NU19 505 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 COL4A3BPQ9Y5P4 624 aa8.41□□□□□ -1.06
CLDND1-229ENST00000513988 HIVEP1P15822 2718 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 I3L4J1 428 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 K7EQS6 105 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 ZNF213O14771 459 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 NDUFS2O75306 463 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 RFPL3O75679 317 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 B3GAT3O94766 335 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 FGF19O95750 216 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 SRGAP2CP0DJJ0 459 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 SFTPCP11686 197 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 MAOBP27338 520 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 SMARCA1P28370 1054 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 GABRR2P28476 465 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 GRNP28799 593 aaKnown RBP8.4□□□□□ -1.06
CLDND1-229ENST00000513988 EPHB3P54753 998 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 MRPS21P82921 87 aaKnown RBP8.4□□□□□ -1.06
CLDND1-229ENST00000513988 PLD1Q13393 1074 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 SF3A1Q15459 793 aaKnown RBP8.4□□□□□ -1.06
CLDND1-229ENST00000513988 INAVAQ3KP66 663 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 EOGTQ5NDL2 527 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 ZNF787Q6DD87 383 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 GAREM2Q75VX8 874 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 NIPA1Q7RTP0 329 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 ZC3H18Q86VM9 953 aaKnown RBP8.4□□□□□ -1.06
CLDND1-229ENST00000513988 PLA2G4DQ86XP0 818 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 FOXJ1Q92949 421 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 CPB2Q96IY4 423 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 ZNF577Q9BSK1 485 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 TASP1Q9H6P5 420 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 ECT2Q9H8V3 914 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 AFF4Q9UHB7 1163 aaKnown RBP8.4□□□□□ -1.06
CLDND1-229ENST00000513988 MAFFQ9ULX9 164 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 YIPF1Q9Y548 306 aa8.4□□□□□ -1.06
CLDND1-229ENST00000513988 SPENQ96T58 3664 aaKnown RBP8.4□□□□□ -1.06
CLDND1-229ENST00000513988 PHLPP2Q6ZVD8 1323 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 IGHV1OR15-9A0A0B4J2B8 117 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 RCCD1A6NED2 376 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 ANTXRLA6NF34 631 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 WDR64B1ANS9 1081 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 H7C4K7 107 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 SGK1O00141 431 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 TSPAN1O60635 241 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 THP07101 528 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 RLBP1P12271 317 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 ITGB6P18564 788 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 BFSP1Q12934 665 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 UGCGQ16739 394 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 CCDC81Q6ZN84 652 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 SIRT2Q8IXJ6 389 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms