RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 OR10T2Q8NGX3 314 aa11.89□□□□□ -0.51
DDX41-216ENST00000513562 RIN3Q8TB24 985 aa11.89□□□□□ -0.51
DDX41-216ENST00000513562 EXOC4Q96A65 974 aa11.89□□□□□ -0.51
DDX41-216ENST00000513562 SEPT5Q99719 369 aaPredicted RBP11.89□□□□□ -0.51
DDX41-216ENST00000513562 ANKFY1Q9P2R3 1169 aa11.89□□□□□ -0.51
DDX41-216ENST00000513562 EVLQ9UI08 416 aaPredicted RBP11.89□□□□□ -0.51
DDX41-216ENST00000513562 KLK13Q9UKR3 277 aa11.89□□□□□ -0.51
DDX41-216ENST00000513562 UBQLN1Q9UMX0 589 aaKnown RBP11.89□□□□□ -0.51
DDX41-216ENST00000513562 NUP210Q8TEM1 1887 aaPredicted RBP11.89□□□□□ -0.51
DDX41-216ENST00000513562 TTC26A0AVF1 554 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 HIP1RO75146 1068 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 CAPNS1P04632 268 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 ODC1P11926 461 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 BCKDHBP21953 392 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 DDX6P26196 483 aaKnown RBP eCLIP11.88□□□□□ -0.51
DDX41-216ENST00000513562 CCT6AP40227 531 aaKnown RBP11.88□□□□□ -0.51
DDX41-216ENST00000513562 DGKEP52429 567 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 MCL1Q07820 350 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 LMAN2Q12907 356 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 BFSP1Q12934 665 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 MAPK7Q13164 816 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 UAP1L1Q3KQV9 507 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 MGAT5BQ3V5L5 792 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 CC2D1AQ6P1N0 951 aaPredicted RBP11.88□□□□□ -0.51
DDX41-216ENST00000513562 TMEM150AQ86TG1 271 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 RASSF3Q86WH2 238 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 PROSER1Q86XN7 944 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 TSTD1Q8NFU3 115 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 CD101Q93033 1021 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 KIF12Q96FN5 646 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 DRC1Q96MC2 740 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 ZCWPW1Q9H0M4 648 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 SLC32A1Q9H598 525 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 C17orf75Q9HAS0 396 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 TDP1Q9NUW8 608 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 INVSQ9Y283 1065 aa11.88□□□□□ -0.51
DDX41-216ENST00000513562 KIF26AQ9ULI4 1882 aaPredicted RBP11.88□□□□□ -0.51
DDX41-216ENST00000513562 FAM221BA6H8Z2 402 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 PPEF2O14830 753 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 SLC16A4O15374 487 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 NMT1P30419 496 aaKnown RBP11.87□□□□□ -0.51
DDX41-216ENST00000513562 GUCY2FP51841 1108 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 NLRP12P59046 1061 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 LILRA4P59901 499 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 STRN3Q13033 797 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 ORC2Q13416 577 aaPredicted RBP11.87□□□□□ -0.51
DDX41-216ENST00000513562 ZNF268Q14587 947 aaPredicted RBP11.87□□□□□ -0.51
DDX41-216ENST00000513562 SLC39A12Q504Y0 691 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 ZPBP2Q6X784 338 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 PIP4P1Q86T03 277 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 CPA6Q8N4T0 437 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 MAB21L3Q8N8X9 362 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 COL26A1Q96A83 441 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 CNOT6LQ96LI5 555 aaKnown RBP11.87□□□□□ -0.51
DDX41-216ENST00000513562 NTPCRQ9BSD7 190 aaKnown RBP11.87□□□□□ -0.51
DDX41-216ENST00000513562 RUSC1Q9BVN2 902 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 TPSD1Q9BZJ3 242 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 HAPLN2Q9GZV7 340 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 ECT2Q9H8V3 914 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 DDX19AQ9NUU7 478 aaKnown RBP11.87□□□□□ -0.51
DDX41-216ENST00000513562 KIAA1024Q9UPX6 916 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 GPSM3Q9Y4H4 160 aa11.87□□□□□ -0.51
DDX41-216ENST00000513562 SPAARA0A1B0GVQ0 90 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 UPK3BL1B0FP48 263 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 UPK3BL2E5RIL1 263 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 H0Y626 953 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 CLDN3O15551 220 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 XPOTO43592 962 aaKnown RBP11.86□□□□□ -0.51
DDX41-216ENST00000513562 TRIM16O95361 564 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 F11P03951 625 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 CYP11A1P05108 521 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 CLTAP09496 248 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 HMGA1P17096 107 aaKnown RBP11.86□□□□□ -0.51
DDX41-216ENST00000513562 PAX3P23760 479 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 DHPSP49366 369 aaPredicted RBP11.86□□□□□ -0.51
DDX41-216ENST00000513562 FXR2P51116 673 aaKnown RBP eCLIP11.86□□□□□ -0.51
DDX41-216ENST00000513562 SIM1P81133 766 aaPredicted RBP11.86□□□□□ -0.51
DDX41-216ENST00000513562 PPP2R3AQ06190 1150 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 TRIM29Q14134 588 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 MTF1Q14872 753 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 TAF12Q16514 161 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 SOWAHCQ53LP3 525 aaPredicted RBP11.86□□□□□ -0.51
DDX41-216ENST00000513562 TRIM61Q5EBN2 209 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 ANO7Q6IWH7 933 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 TMEM161BQ8NDZ6 487 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 CCDC26Q8TAB7 109 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 GIPC2Q8TF65 315 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 C2orf15Q8WU43 125 aaKnown RBP11.86□□□□□ -0.51
DDX41-216ENST00000513562 OSCP1Q8WVF1 389 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 SPIRE2Q8WWL2 714 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 PIGKQ92643 395 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 SENP8Q96LD8 212 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 SDK1Q7Z5N4 2213 aa11.86□□□□□ -0.51
DDX41-216ENST00000513562 LACTBL1A8MY62 500 aa11.85□□□□□ -0.51
DDX41-216ENST00000513562 TNFRSF10BO14763 440 aa11.85□□□□□ -0.51
DDX41-216ENST00000513562 MAPTP10636 758 aaKnown RBP11.85□□□□□ -0.51
DDX41-216ENST00000513562 HAPLN1P10915 354 aaPredicted RBP11.85□□□□□ -0.51
DDX41-216ENST00000513562 ENGP17813 658 aa11.85□□□□□ -0.51
DDX41-216ENST00000513562 TNFSF9P41273 254 aa11.85□□□□□ -0.51
DDX41-216ENST00000513562 MAPK8P45983 427 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms